MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-2-P2a

Family name MIR-2 (all species)
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-13a
Paralogues Hme-Mir-2-P1-v1  Hme-Mir-2-P2b  Hme-Mir-2-P3-v1  Hme-Mir-2-P4  Hme-Mir-2-P7  Hme-Mir-2-P8 
Orthologues Aga-Mir-2-P2a  Bge-Mir-2-P2a  Dan-Mir-2-P2a  Dlo-Mir-2-P2a  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2a  Dmo-Mir-2-P2a  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2a  Dya-Mir-2-P2a  Gpa-Mir-2-P2a  Gsp-Mir-2  Ple-Mir-2  Tca-Mir-2-P2a 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(Hmel_1)		 HE671256: 344637-344695 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P2a)		 Mir-71 HE671256: 336024-336085 [+] Ensembl
Mir-2-P1-v2 HE671256: 344481-344540 [+] Ensembl
Mir-2-P1-v1 HE671256: 344483-344538 [+] Ensembl
Mir-2-P2a HE671256: 344637-344695 [+] Ensembl
Mir-2-P2b HE671256: 344775-344830 [+] Ensembl
Mir-2-P3-v2 HE671256: 344897-344955 [+] Ensembl
Mir-2-P3-v1 HE671256: 344898-344954 [+] Ensembl
Mir-2-P4 HE671256: 345032-345089 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
UCAAAAUAUUUGUAUGUUUUCGGGCCUAGCCUGUCAAAGAGGCGGUGAAAUGUCCUUUUCCCUUCAUAUCACAGCCACUUUGAUGUGGUCGGUUUACGGAGACCACUUAGCGUAUCGAG
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Structure
        10         20          30         40        50        
UCAAAAUAUUUGUAUGU-     --|   UA   -        A   G    A   UCCUU 
                  UUUCG  GGCC  GCC UGUCAAAG GGC GUGA AUG     U
                  GAGGC  UUGG  UGG GUAGUUUC CCG CACU UAC     U
GAGCUAUGCGAUUCACCA     AU^   C-   U        A   A    A   UUCCC 
       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-2-P2a_5p*
mirBase accessionNone
Sequence 
0- CUGUCAAAGAGGCGGUGAAAUG -22
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Mature sequence

Hme-Mir-2-P2a_3p
mirBase accessionMIMAT0024940
Sequence 
36- UAUCACAGCCACUUUGAUGUGGU -59
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