MirGeneDB 3.0
MirGeneDB ID

Dmo-Mir-2-P2a

Family name MIR-2 (all species)
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-13a
Paralogues Dmo-Mir-2-P1  Dmo-Mir-2-P2b1  Dmo-Mir-2-P2b2  Dmo-Mir-2-P3b  Dmo-Mir-2-P4a-v1  Dmo-Mir-2-P4b-v1  Dmo-Mir-2-P5  Dmo-Mir-2-P6a  Dmo-Mir-2-P6b  Dmo-Mir-2-P6c  Dmo-Mir-2-P7  Dmo-Mir-2-P8  Dmo-Mir-2-P9 
Orthologues Aga-Mir-2-P2a  Bge-Mir-2-P2a  Dan-Mir-2-P2a  Dlo-Mir-2-P2a  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2a  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2a  Dya-Mir-2-P2a  Gpa-Mir-2-P2a  Gsp-Mir-2  Hme-Mir-2-P2a  Ple-Mir-2  Tca-Mir-2-P2a 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(Dmoj_caf1)		 scaffold_6540: 10568361-10568422 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P2a)		 Mir-2-P1 scaffold_6540: 10568108-10568173 [+] Ensembl
Mir-2-P2a scaffold_6540: 10568361-10568422 [+] Ensembl
Mir-2-P2b1 scaffold_6540: 10568529-10568588 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
ACGAUCUCCGCCCAUUCAAUUCUUGCGUAACUCUUCAAGGGGUUGUGAAAUGUAGCCAUUAUCAAGUCAUAUCACAGCCAUUUUGAUGAGUUUCGUGUGAAUUGCUUUCAGCAUUGUCCCAU
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Structure
        10          20        30        40         50          
ACGAUCUCCGCCCAUUC--     U    U     U      -|       A   UAGCCAU 
                   AAUUC UGCG AACUC UCAAGG GGUUGUGA AUG       \
                   UUAAG GUGC UUGAG AGUUUU CCGACACU UAC       U
UACCCUGUUACGACUUUCG     U    U     U      A^       A   UGAACUA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Em Fe Ma Ma
Star sequence

Dmo-Mir-2-P2a_5p*
mirBase accessionNone
Sequence 
0- CUCUUCAAGGGGUUGUGAAAUG -22
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Mature sequence

Dmo-Mir-2-P2a_3p
mirBase accessionMIMAT0008661
Sequence 
39- UAUCACAGCCAUUUUGAUGAGUU -62
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