MirGeneDB 3.0
MirGeneDB ID

Dmo-Mir-2-P9

Family name MIR-2 (all species)
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues Dmo-Mir-2-P1  Dmo-Mir-2-P2a  Dmo-Mir-2-P2b1  Dmo-Mir-2-P2b2  Dmo-Mir-2-P3b  Dmo-Mir-2-P4a-v1  Dmo-Mir-2-P4b-v1  Dmo-Mir-2-P5  Dmo-Mir-2-P6a  Dmo-Mir-2-P6b  Dmo-Mir-2-P6c  Dmo-Mir-2-P7  Dmo-Mir-2-P8 
Orthologues Asu-Mir-2-o9  Dan-Mir-2-P9  Dme-Mir-2-P9-v1  Dsi-Mir-2-P9-v1  Dya-Mir-2-P9-v1  Gpa-Mir-2-P9  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) Glossinidae + Drosophilidae
Node of Origin (family) Protostomia
Genome context
(Dmoj_caf1)		 scaffold_6540: 5225196-5225264 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P9)		 Mir-9717 scaffold_6540: 5225063-5225119 [-] Ensembl
Mir-2-P9 scaffold_6540: 5225196-5225264 [+] Ensembl
Mir-3-P3 scaffold_6540: 5225350-5225408 [+] Ensembl
Seed UAAGGAA
Precursor
(pre-Mir +30nt flank)		 
UUGAAGCGAUAUCAAUUUAUAUCGAGUUAUCUAAGGAAAUAGUAGCCGUGAUUUUACAUUUCAACCUAUUACAUAUCACAGUUGCUGUUUCUUUUAGAUAGCUCUUUUGUAAGCAGCCUAACAGUCGGU
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Structure
        10         20         30         40        50        60   
UUGAAGCGAUAUCAAUU-    UC-         -|             C     UUUACAUUUC 
                  UAUA   GAGUUAUCU AAGGAAAUAGUAGC GUGAU          A
                  AUGU   CUCGAUAGA UUUCUUUGUCGUUG CACUA          A
UGGCUGACAAUCCGACGA    UUU         U^             A     UACAUUAUCC 
       120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Em Fe Ma Ma
Mature sequence

Dmo-Mir-2-P9_5p
mirBase accessionNone
Sequence 
0- CUAAGGAAAUAGUAGCCGUGAU -22
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Star sequence

Dmo-Mir-2-P9_3p*
mirBase accessionNone
Sequence 
46- CACAGUUGCUGUUUCUUUUAGAU -69
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