MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-2-P2a

Family name MIR-2 (all species)
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-13a
Paralogues Dsi-Mir-2-P1-v1  Dsi-Mir-2-P2b1  Dsi-Mir-2-P2b2  Dsi-Mir-2-P3a  Dsi-Mir-2-P3b  Dsi-Mir-2-P4a-v1  Dsi-Mir-2-P4b-v1  Dsi-Mir-2-P5  Dsi-Mir-2-P6a  Dsi-Mir-2-P6b  Dsi-Mir-2-P6c  Dsi-Mir-2-P7  Dsi-Mir-2-P8  Dsi-Mir-2-P9-v1 
Orthologues Aga-Mir-2-P2a  Bge-Mir-2-P2a  Dan-Mir-2-P2a  Dlo-Mir-2-P2a  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2a  Dmo-Mir-2-P2a  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dya-Mir-2-P2a  Gpa-Mir-2-P2a  Gsp-Mir-2  Hme-Mir-2-P2a  Ple-Mir-2  Tca-Mir-2-P2a 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 3R: 9985528-9985590 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P2a)		 Mir-2-P1-v1 3R: 9985314-9985380 [+] UCSC Ensembl
Mir-2-P1-v2 3R: 9985314-9985380 [+] UCSC Ensembl
Mir-2-P2a 3R: 9985528-9985590 [+] UCSC Ensembl
Mir-2-P2b1 3R: 9985663-9985722 [+] UCSC Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
UUCGUGAUCCAAGCCAUAGUUCUUACGUAACUCCUCAAAGGGUUGUGAAAUGUCGACUAUUAUCUACUCAUAUCACAGCCAUUUUGAUGAGUUUCGUGCGAAUCUCGGCAGCGGAUCGAAAAA
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Structure
        10          20        30        40         50        60
UUCGUGAUCCAAGCCAUA--    U    U     C      -|       A   UCGACUA 
                    GUUC UACG AACUC UCAAAG GGUUGUGA AUG       U
                    UAAG GUGC UUGAG AGUUUU CCGACACU UAC       U
AAAAAGCUAGGCGACGGCUC    C    U     U      A^       A   UCAUCUA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
He Wh
Star sequence

Dsi-Mir-2-P2a_5p*
mirBase accessionNone
Sequence 
0- CUCCUCAAAGGGUUGUGAAAUG -22
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Mature sequence

Dsi-Mir-2-P2a_3p
mirBase accessionMIMAT0008881
Sequence 
40- UAUCACAGCCAUUUUGAUGAGUU -63
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