MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-2-P2l

Family name MIR-2 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2m  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Lpo-Mir-2-P4h  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4k  Lpo-Mir-2-P4l 
Orthologues Dma-Mir-2-o2  Dma-Mir-2-P2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666934.1: 92420-92479 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P2l)		 Mir-71-P12 NW_013666934.1: 89649-89707 [+] Ensembl
Mir-2-P1l NW_013666934.1: 91324-91386 [+] Ensembl
Mir-2-P2l NW_013666934.1: 92420-92479 [+] Ensembl
Mir-2-P3l NW_013666934.1: 93277-93337 [+] Ensembl
Mir-2-P4l NW_013666934.1: 100459-100519 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
ACUUAACCACUGAUUUCAAGUAUCUCCUGAUCGCCAAAAUUGCUGUGAUCUGUUUGCAAGUGAAAUCAUAUCACAGCCAUCUUGACGACUCGUGGGAUAGCCACUGUAUCUCCAACGUUU
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Structure
        10        20         30         40        50         
ACUUAACCACUGAUUUCAAG-      C   -|  C   A  U        C  UUUGCA 
                     UAUCUC UGA UCG CAA AU GCUGUGAU UG      A
                     AUAGGG GCU AGC GUU UA CGACACUA AC      G
UUUGCAACCUCUAUGUCACCG      U   C^  A   C  C        U  UAAAGU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-2-P2l_5p*
mirBase accessionNone
Sequence 
0- UCGCCAAAAUUGCUGUGAUCUG -22
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Mature sequence

Lpo-Mir-2-P2l_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCCAUCUUGACGACU -60
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