MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-2-P3i

Family name MIR-2 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Lpo-Mir-2-P4h  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4k  Lpo-Mir-2-P4l 
Orthologues Aae-Mir-2-P3  Aga-Mir-2-P3  Bge-Mir-2-P3-v1  Cbr-Mir-2-o3  Cel-Mir-2-o3  Dlo-Mir-2-P3-v1  Dma-Mir-2-P3  Dpu-Mir-2-P3  Gsp-Mir-2  Hme-Mir-2-P3-v1  Isc-Mir-2-P3  Ple-Mir-2  Tca-Mir-2-P3-v1 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665749.1: 441269-441330 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P3i)		 Mir-2-P4i NW_013665749.1: 433863-433924 [-] Ensembl
Mir-2-P3i NW_013665749.1: 441269-441330 [-] Ensembl
Mir-2-P1i NW_013665749.1: 443792-443855 [-] Ensembl
Mir-71-P9 NW_013665749.1: 444691-444750 [-] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
GUCUGUAAAUAGAUAGUCAGAUCCCCAUCACUCACAAAGUGGCUGUUGUAUGCUUCAACUAGAGUUCAUAUCACAGCCAGCUUUGAUGAGCGAAGAGGACACUGUUGACGUCAGAACCUCAC
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Structure
        10         20         30          40        50         
GUCUGUAAAUAGAUAGU-   A-   CCA  A    -     -|      U     CUUCAA 
                  CAG  UCC   UC CUCA CAAAG UGGCUGU GUAUG      C
                  GUC  AGG   AG GAGU GUUUC ACCGACA UAUAC      U
CACUCCAAGACUGCAGUU   AC   AGA  C    A     G^      C     UUGAGA 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-2-P3i_5p*
mirBase accessionNone
Sequence 
0- CUCACAAAGUGGCUGUUGUAUG -22
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Mature sequence

Lpo-Mir-2-P3i_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCCAGCUUUGAUGAGCG -62
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