MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-2-P3g

Family name MIR-2 (all species)
Seed AUCACAG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Lpo-Mir-2-P4h  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4k  Lpo-Mir-2-P4l 
Orthologues Aae-Mir-2-P3  Bge-Mir-2-P3  Cbr-Mir-2-o3  Cel-Mir-2-o3  Dma-Mir-2-P3  Dpu-Mir-2-P3  Hme-Mir-2-P3-v1  Hme-Mir-2-P3-v2  Isc-Mir-2-P3  Tca-Mir-2-P3-v1  Tca-Mir-2-P3-v2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665638.1: 1327878-1327939 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCAUGACGUUAGGUUUUUCCUCACCCCACUCACAAAGUGGCUGUUAUGUGUCUUAAGCAAUAAUCAUAUCACAGCCAGCUUUGAUGAGCGGGGCGGGCGAGUCACAGAAAACGUUCUUCG
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Structure
        10         20         30          40        50         
CAGCAUGACGUUAGGUUU-   -   A    A    -     -|      U     UCUUAA 
                   UUC CUC CCCC CUCA CAAAG UGGCUGU AUGUG      G
                   GAG GGG GGGG GAGU GUUUC ACCGACA UAUAC      C
GCUUCUUGCAAAAGACACU   C   C    C    A     G^      C     UAAUAA 
120       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-2-P3g_5p*
mirBase accessionNone
Sequence 
0- CUCACAAAGUGGCUGUUAUGUG -22
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Mature sequence

Lpo-Mir-2-P3g_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCCAGCUUUGAUGAGCG -62
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