MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-2-P2m

Family name MIR-2 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Lpo-Mir-2-P4h  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4k  Lpo-Mir-2-P4l 
Orthologues Dma-Mir-2-o2  Dma-Mir-2-P2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013668542.1: 83483-83542 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P2m)		 Mir-71-P13 NW_013668542.1: 80832-80891 [+] Ensembl
Mir-2-P1m NW_013668542.1: 81176-81238 [+] Ensembl
Mir-2-P2m NW_013668542.1: 83483-83542 [+] Ensembl
Mir-2-P3m NW_013668542.1: 87725-87786 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
UACAUCAGAAAAAGCCCGUGUCUCACUUGGCCGCCAAUAUGGCAGUGAUAUGUUGUGAAGUUUGUCAUAUCACAGCCAUCUUGACGUGUCUUGAGAGGAUAAUCUUGCAUCACAGAGGAA
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Structure
        10        20            30         40        50         
UACAUCAGAAAAAGCCCGUG----|    CUU   -  C   U     A        UUGUGA 
                        UCUCA   GGC CG CAA AUGGC GUGAUAUG      \
                        AGAGU   CUG GC GUU UACCG CACUAUAC      A
AAGGAGACACUACGUUCUAAUAGG^    U--   U  A   C     A        UGUUUG 
.       110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-2-P2m_5p*
mirBase accessionNone
Sequence 
0- CCGCCAAUAUGGCAGUGAUAUG -22
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Mature sequence

Lpo-Mir-2-P2m_3p
mirBase accessionNone
Sequence 
37- UAUCACAGCCAUCUUGACGUGUC -60
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