MirGeneDB ID | Dma-Novel-1 |
---|---|
Family name | DMA-NOVEL-1 (all species) |
Species | Large common water flea (Daphnia magna) |
MiRBase ID | |
Paralogues | |
Orthologues | |
Node of Origin (locus) | D. magna |
Node of Origin (family) | D. magna |
Genome context (DMA_ASM399081) |
|
Seed | CCUGUUU |
Precursor (pre-Mir +30nt flank) |
GCCUGUUUAGGGUCGUCAAGCGGUCCCCGAUCUCUAUUCCACGGGCUUCCUUCGACAGAGCAAGet precursor sequence |
Structure | 10 20 30 -- - U UC| AAGC UCCCCGA GC CUGUU AGGG GUC GG \ CG GACAG UUCC CGG CC U AA A C UU^ GCA- UUAUCUC 60 50 40 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Mature sequence | Dma-Novel-1_5p |
mirBase accession | None |
Sequence |
0- GCCUGUUUAGGGUCGUCAAGCGG -23
Get sequence
|
Co-mature sequence | Dma-Novel-1_3p |
mirBase accession | None |
Sequence |
40- ACGGGCUUCCUUCGACAGAGCAA -63
Get sequence
|