MirGeneDB 3.0
107 microRNA genes with seed AAUCUCA
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Pca-Mir-216-P1 None MIR-216 AAUCUCA None None KQ715627.1 149119 149185 - Nephrozoa Nephrozoa Unknown 1
Aae-Mir-216-P2 aae-mir-1889 MIR-216 AAUCUCA MIMAT0014233 MIMAT0014234 supercont1.68 2720796 2720917 - Nephrozoa Nephrozoa No 1
Aga-Mir-216-P2 aga-mir-1889 MIR-216 AAUCUCA None MIMAT0007859 NC_064601.1 37380031 37380129 - Nephrozoa Nephrozoa No 1
Ava-Mir-216-P2 None MIR-216 AAUCUCA None None CP075497.1 11031484 11031546 - Nephrozoa Nephrozoa No
Bfl-Mir-216-P2 bfl-mir-216 MIR-216 AAUCUCA MIMAT0009495 MIMAT0019150 NC_049979.1 16400702 16400762 - Nephrozoa Nephrozoa No 1
Bge-Mir-216-P2 None MIR-216 AAUCUCA None None KZ614411.1 695302 695361 - Nephrozoa Nephrozoa No 1 1
Bko-Mir-216-P2 None MIR-216 AAUCUCA None None PJRA01000114.1 1223645 1223709 - Nephrozoa Nephrozoa No
Bpl-Mir-216-P2 None MIR-216 AAUCUCA None None QEOQ01000141.1 555888 555952 + Nephrozoa Nephrozoa No
Cbr-Mir-216-P2 cbr-mir-259 MIR-216 AAUCUCA MIMAT0000508 None V 10501579 10501642 + Nephrozoa Nephrozoa No
Cel-Mir-216-P2 cel-mir-259 MIR-216 AAUCUCA MIMAT0000314 MIMAT0020342 chrV 10539046 10539107 - Nephrozoa Nephrozoa No
Csc-Mir-216-P2 None MIR-216 AAUCUCA None None NW_019384639.1 169670 169728 + Nephrozoa Nephrozoa No 1
Dan-Mir-216-P2 dan-mir-304 MIR-216 AAUCUCA MIMAT0008413 None scaffold_12929 2899119 2899186 - Nephrozoa Nephrozoa No 1
Dlo-Mir-216-P2 None MIR-216 AAUCUCA None None NC_087231.1 9574010 9574074 + Nephrozoa Nephrozoa No 1 1
Dma-Mir-216-P2 None MIR-216 AAUCUCA None None NC_046176.1 6126328 6126441 + Nephrozoa Nephrozoa Yes 1
Dme-Mir-216-P2 dme-mir-304 MIR-216 AAUCUCA MIMAT0000390 MIMAT0020826 X 15508970 15509037 + Nephrozoa Nephrozoa No 1
Dmo-Mir-216-P2 dmo-mir-304 MIR-216 AAUCUCA MIMAT0008657 None scaffold_6359 3259172 3259240 + Nephrozoa Nephrozoa No 1
Dpu-Mir-216-P2 None MIR-216 AAUCUCA None None DAPPUscaffold_1 1848248 1848369 - Nephrozoa Nephrozoa No 1
Dsi-Mir-216-P2 dsi-mir-304 MIR-216 AAUCUCA MIMAT0008882 None X 14556662 14556729 + Nephrozoa Nephrozoa No 1
Dya-Mir-216-P2 dya-mir-304 MIR-216 AAUCUCA MIMAT0009073 None X 9589360 9589427 + Nephrozoa Nephrozoa No 1
Hme-Mir-216-P2 None MIR-216 AAUCUCA None None HE669534 42003 42127 + Nephrozoa Nephrozoa No
Isc-Mir-216-P2 isc-mir-5307 MIR-216 AAUCUCA MIMAT0021377 None NW_024609836.1 71439542 71439601 + Nephrozoa Nephrozoa Unknown
Pca-Mir-216-P2 None MIR-216 AAUCUCA None None KQ715014.1 185145 185204 - Nephrozoa Nephrozoa No 1
Tca-Mir-216-P2 tca-mir-3477 MIR-216 AAUCUCA MIMAT0018736 MIMAT0018737 LG3 21686284 21686342 - Nephrozoa Nephrozoa No 1
Tur-Mir-216-P2 tur-mir-5737 MIR-216 AAUCUCA MIMAT0023104 MIMAT0023105 HE587311.1 1901303 1901367 - Nephrozoa Nephrozoa Unknown 1
Aca-Mir-216-P2b aca-mir-216a MIR-216 AAUCUCA MIMAT0021875 None 1 256236305 256236366 - Vertebrata Nephrozoa No
Ami-Mir-216-P2b ami-mir-216a MIR-216 AAUCUCA MIMAT0038242 None NW_017713592.1 3395052 3395113 - Vertebrata Nephrozoa Unknown
Bta-Mir-216-P2b bta-mir-216a MIR-216 AAUCUCA MIMAT0009265 None NC_037338.1 38640719 38640780 - Vertebrata Nephrozoa No
Cfa-Mir-216-P2b cfa-mir-216a MIR-216 AAUCUCA MIMAT0009849 None chr10 56761455 56761516 - Vertebrata Nephrozoa No
Cja-Mir-216-P2b None MIR-216 AAUCUCA None None CM021928.1 56258492 56258553 + Vertebrata Nephrozoa Unknown
Cli-Mir-216-P2b cli-mir-216a MIR-216 AAUCUCA MIMAT0038596 MIMAT0038597 scaffold628 130781 130841 + Vertebrata Nephrozoa No 1
Cmi-Mir-216-P2b None MIR-216 AAUCUCA None None KI635877.1 5034374 5034435 + Vertebrata Nephrozoa No
Cpi-Mir-216-P2b cpi-mir-216a MIR-216 AAUCUCA MIMAT0037843 None AHGY01402627 366 427 - Vertebrata Nephrozoa No
Cpo-Mir-216-P2b cpo-mir-216a MIR-216 AAUCUCA MIMAT0047119 MIMAT0047120 scaffold_48 8647413 8647474 + Vertebrata Nephrozoa No
Dno-Mir-216-P2b dno-mir-216a MIR-216 AAUCUCA MIMAT0047762 MIMAT0047763 JH567881 176266 176327 - Vertebrata Nephrozoa No
Dre-Mir-216-P2b dre-mir-216a MIR-216 AAUCUCA MIMAT0001284 None chr22 28779961 28780023 - Vertebrata Nephrozoa No
Eca-Mir-216-P2b eca-mir-216a MIR-216 AAUCUCA MIMAT0013072 None CM009162.1 45359145 45359204 + Vertebrata Nephrozoa Unknown
Ete-Mir-216-P2b None MIR-216 AAUCUCA None None JH980337 15879518 15879578 + Vertebrata Nephrozoa Unknown 1
Gga-Mir-216-P2b gga-mir-216a MIR-216 AAUCUCA MIMAT0001131 None 3 345249 345307 - Vertebrata Nephrozoa No
Gja-Mir-216-P2b None MIR-216 AAUCUCA None None NW_015241806.1 243 304 - Vertebrata Nephrozoa Unknown
Gmo-Mir-216-P2b gmo-mir-216a MIR-216 AAUCUCA MIMAT0044329 MIMAT0044330 scaffold03540 56 118 - Vertebrata Nephrozoa No 1
Hsa-Mir-216-P2b hsa-mir-216a MIR-216 AAUCUCA MIMAT0000273 MIMAT0022844 chr2 55988980 55989041 - Vertebrata Nephrozoa No
Laf-Mir-216-P2b None MIR-216 AAUCUCA None None GL010079.1 6059046 6059107 + Vertebrata Nephrozoa Unknown
Lch-Mir-216-P2b None MIR-216 AAUCUCA None None JH127673.1 312337 312398 + Vertebrata Nephrozoa Unknown
Loc-Mir-216-P2b None MIR-216 AAUCUCA None None LG16 3942115 3942176 + Vertebrata Nephrozoa No
Mal-Mir-216-P2b None MIR-216 AAUCUCA None None KV884748.1 2101432 2101494 + Vertebrata Nephrozoa Unknown 1
Mdo-Mir-216-P2b mdo-mir-216 MIR-216 AAUCUCA MIMAT0004131 None 1 638493866 638493927 + Vertebrata Nephrozoa Unknown
Mml-Mir-216-P2b mml-mir-216a MIR-216 AAUCUCA MIMAT0006242 MIMAT0026848 CM014348.1 52670838 52670899 + Vertebrata Nephrozoa No
Mmr-Mir-216-P2b None MIR-216 AAUCUCA None None CM007664.1 3903981 3904042 - Vertebrata Nephrozoa Unknown
Mmu-Mir-216-P2b mmu-mir-216a MIR-216 AAUCUCA MIMAT0000662 MIMAT0017054 chr11 28757018 28757079 + Vertebrata Nephrozoa No
Mun-Mir-216-P2b None MIR-216 AAUCUCA None None LR594634.1 100186241 100186302 + Vertebrata Nephrozoa Unknown
Neu-Mir-216-P2b None MIR-216 AAUCUCA None None CM051813.1 650208194 650208255 + Vertebrata Nephrozoa Unknown
Oan-Mir-216-P2b oan-mir-216a MIR-216 AAUCUCA MIMAT0007223 MIMAT0007224 NC_041736.1 56809006 56809067 + Vertebrata Nephrozoa No
Ocu-Mir-216-P2b ocu-mir-216a MIR-216 AAUCUCA MIMAT0048341 MIMAT0048342 chr2 130101540 130101601 + Vertebrata Nephrozoa No
Pab-Mir-216-P2b None MIR-216 AAUCUCA None None CM054691.2 76393796 76393857 + Vertebrata Nephrozoa No
Pbv-Mir-216-P2b pbv-mir-216a MIR-216 AAUCUCA MIMAT0039022 MIMAT0039023 KE953947.1 195087 195148 + Vertebrata Nephrozoa No
Rno-Mir-216-P2b rno-mir-216a MIR-216 AAUCUCA MIMAT0000886 MIMAT0017160 chr14 113112147 113112208 + Vertebrata Nephrozoa No
Sha-Mir-216-P2b sha-mir-216a MIR-216 AAUCUCA MIMAT0022777 None GL834734.1 1019972 1020033 + Vertebrata Nephrozoa No
Spt-Mir-216-P2b None MIR-216 AAUCUCA None None QEPC01007720.1 928552 928613 + Vertebrata Nephrozoa Unknown
Sto-Mir-216-P2b None MIR-216 AAUCUCA None None BFAA01001329.1 110746 110807 + Vertebrata Nephrozoa Unknown 1
Tgu-Mir-216-P2b tgu-mir-216a MIR-216 AAUCUCA MIMAT0014576 MIMAT0027008 3 86150167 86150227 - Vertebrata Nephrozoa Yes
Tni-Mir-216-P2b tni-mir-216a MIR-216 AAUCUCA MIMAT0002974 None 17 5747764 5747826 + Vertebrata Nephrozoa Unknown 1
Xtr-Mir-216-P2b xtr-mir-216 MIR-216 AAUCUCA MIMAT0003629 None chr5 26049038 26049099 - Vertebrata Nephrozoa No
Ebu-Mir-216-P2b1 None MIR-216 AAUCUCA None None FYBX02010123.1 688200 688261 + Cyclostomata Nephrozoa Unknown 1
Pma-Mir-216-P2b1 pma-mir-216a MIR-216 AAUCUCA MIMAT0019525 MIMAT0019526 NC_046074.1 1952348 1952411 - Cyclostomata Nephrozoa Unknown
Xla-Mir-216-P2b3 xla-mir-216 MIR-216 AAUCUCA MIMAT0046536 MIMAT0046537 NC_030732.1 33744736 33744797 + X. laevis Nephrozoa No
Xla-Mir-216-P2b4 None MIR-216 AAUCUCA None None NC_030733.1 27719537 27719598 + X. laevis Nephrozoa No
Agr-Mir-216-P2c None MIR-216 AAUCUCA None None JABBOT010000010.1 20312836 20312896 - Lophotrochozoa Nephrozoa No 1 1
Cte-Mir-216-P2c cte-mir-216a MIR-216 AAUCUCA MIMAT0009535 None CAPTEscaffold_192 34755 34815 - Lophotrochozoa Nephrozoa No 1
Dgr-Mir-216-P2c None MIR-216 AAUCUCA None None CAJFCJ010000014.1 1075923 1075987 - Lophotrochozoa Nephrozoa Unknown 1
Eba-Mir-216-P2c None MIR-216 AAUCUCA None None WURV02156550.1 14420 14477 + Lophotrochozoa Nephrozoa Unknown 1 1
Efe-Mir-216-P2c None MIR-216 AAUCUCA None None Efet.01.28683 1127 1187 + Lophotrochozoa Nephrozoa No 1 1
Lhy-Mir-216-P2c None MIR-216 AAUCUCA None None scaffold389854_29.2 2789 2847 + Lophotrochozoa Nephrozoa Unknown 1 1 1
Llo-Mir-216-P2c None MIR-216 AAUCUCA None None OU342994.1 2298977 2299034 - Lophotrochozoa Nephrozoa Unknown 1 1
Npo-Mir-216-P2c None MIR-216 AAUCUCA None None JACATO010001670.1 36790 36848 - Lophotrochozoa Nephrozoa Unknown 1 1
Obi-Mir-216-P2c None MIR-216 AAUCUCA None None KQ415847 307656 307715 - Lophotrochozoa Nephrozoa Unknown 1 1
Ofu-Mir-216-P2c None MIR-216 AAUCUCA None None CAIIXF020000008.1 38328620 38328677 + Lophotrochozoa Nephrozoa Unknown 1 1
Ovu-Mir-216-P2c None MIR-216 AAUCUCA None None RXHP01022029.1 191981 192040 - Lophotrochozoa Nephrozoa No 1 1
Pau-Mir-216-P2c None MIR-216 AAUCUCA None None NMRA01000005.1 1647492 1647553 - Lophotrochozoa Nephrozoa Unknown
Snu-Mir-216-P2c None MIR-216 AAUCUCA None None CM049308.1 11133197 11133256 - Lophotrochozoa Nephrozoa Unknown 1
War-Mir-216-P2c None MIR-216 AAUCUCA None None WNLI01040026.1 1269 1327 - Lophotrochozoa Nephrozoa Unknown 1 1
Agr-Mir-216-P2d None MIR-216 AAUCUCA None None JABBOT010000010.1 20313273 20313332 - Lophotrochozoa Nephrozoa No 1
Cte-Mir-216-P2d cte-mir-216c MIR-216 AAUCUCA None MIMAT0013570 CAPTEscaffold_192 33996 34066 - Lophotrochozoa Nephrozoa No
Esc-Mir-216-P2d None MIR-216 AAUCUCA None None JANFOI010000056.1 177212 177271 + Lophotrochozoa Nephrozoa No 1
Hru-Mir-216-P2d None MIR-216 AAUCUCA None None JALGQA010000003.1 15755123 15755181 + Lophotrochozoa Nephrozoa No 1 1
Lgi-Mir-216-P2d lgi-mir-216a MIR-216 AAUCUCA MIMAT0009588 None LOTGIsca_22 807335 807401 + Lophotrochozoa Nephrozoa No 1
Lhy-Mir-216-P2d None MIR-216 AAUCUCA None None scaffold389854_29.2 3428 3487 + Lophotrochozoa Nephrozoa No 1 1 1
Llo-Mir-216-P2d None MIR-216 AAUCUCA None None OU342994.1 2298218 2298276 - Lophotrochozoa Nephrozoa Unknown
Mgi-Mir-216-P2d None MIR-216 AAUCUCA None None scaffold1785 68810 68867 - Lophotrochozoa Nephrozoa No 1 1
Mom-Mir-216-P2d None MIR-216 AAUCUCA None None JARFOD010000002.1 581090 581149 - Lophotrochozoa Nephrozoa Unknown 1
Npo-Mir-216-P2d None MIR-216 AAUCUCA None None JACATO010001670.1 35814 35871 - Lophotrochozoa Nephrozoa Unknown 1 1
Obi-Mir-216-P2d None MIR-216 AAUCUCA None None KQ415847 304811 304870 - Lophotrochozoa Nephrozoa No 1
Ofu-Mir-216-P2d None MIR-216 AAUCUCA None None CAIIXF020000008.1 38331176 38331235 + Lophotrochozoa Nephrozoa Unknown
Ovu-Mir-216-P2d None MIR-216 AAUCUCA None None RXHP01022029.1 185931 185990 - Lophotrochozoa Nephrozoa No 1
Pau-Mir-216-P2d None MIR-216 AAUCUCA None None NMRA01000005.1 1646720 1646777 - Lophotrochozoa Nephrozoa Unknown 1
Pdu-Mir-216-P2d None MIR-216 AAUCUCA None None JAPTHN010000007.1 46914987 46915043 - Lophotrochozoa Nephrozoa No 1
Pve-Mir-216-P2d None MIR-216 AAUCUCA None None Pve_Chr5 380939039 380939099 - Lophotrochozoa Nephrozoa No 1 1
Rph-Mir-216-P2d None MIR-216 AAUCUCA None None CM018538.1 42665214 42665275 + Lophotrochozoa Nephrozoa No 1
Snu-Mir-216-P2d None MIR-216 AAUCUCA None None CM049308.1 11130439 11130498 - Lophotrochozoa Nephrozoa Unknown 1
Lan-Mir-216-P2d1 None MIR-216 AAUCUCA None None LFEI01001594 15818 15879 + L. anatina Nephrozoa Unknown 1 1
Lan-Mir-216-P2d2 None MIR-216 AAUCUCA None None LFEI01000141 488334 488395 + L. anatina Nephrozoa No 1 1
Sme-Mir-216-P2e sme-mir-216 MIR-216 AAUCUCA MIMAT0011245 MIMAT0012143 NNSW01000085_dd_Smes_g4_85 414251 414315 + S. mediterranea Nephrozoa No 1
Sme-Mir-216-P2f sme-mir-747 MIR-216 AAUCUCA MIMAT0004005 MIMAT0012117 NNSW01000007_dd_Smes_g4_7 5198956 5199024 + S. mediterranea Nephrozoa No
Lpo-Mir-216-P2g None MIR-216 AAUCUCA None None NW_013668423.1 43803 43858 - L. polyphemus Nephrozoa No 1
Lpo-Mir-216-P2h None MIR-216 AAUCUCA None None NW_013672844.1 19553 19608 - L. polyphemus Nephrozoa No 1
Lpo-Mir-216-P2i None MIR-216 AAUCUCA None None NW_013668005.1 32569 32625 + L. polyphemus Nephrozoa No 1
Pcr-Mir-216-P2o1 V None MIR-216 AAUCUCA None None CAJQUW010001040.1 133912 133972 - P. crozeri Nephrozoa 2 No
Pcr-Mir-216-P2o2 None MIR-216 AAUCUCA None None CAJQUW010001040.1 151090 151170 - P. crozeri Nephrozoa No 1

(red - mature/co-mature, blue - star)

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