MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-216-P2b

Family name MIR-216 (all species)
Species Cow (Bos taurus)
MiRBase ID bta-mir-216a
Paralogues Bta-Mir-216-P2a 
Orthologues Aae-Mir-216-P2  Aca-Mir-216-P2b  Aga-Mir-216-P2  Ami-Mir-216-P2b  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Cfa-Mir-216-P2b  Cja-Mir-216-P2b  Cli-Mir-216-P2b  Cmi-Mir-216-P2b  Cpi-Mir-216-P2b  Cpo-Mir-216-P2b  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dno-Mir-216-P2b  Dpu-Mir-216-P2  Dre-Mir-216-P2b  Dsi-Mir-216-P2  Dya-Mir-216-P2  Ebu-Mir-216-P2b1  Eca-Mir-216-P2b  Ete-Mir-216-P2b  Gga-Mir-216-P2b  Gja-Mir-216-P2b  Gmo-Mir-216-P2b  Hme-Mir-216-P2  Hsa-Mir-216-P2b  Isc-Mir-216-P2  Laf-Mir-216-P2b  Lch-Mir-216-P2b  Loc-Mir-216-P2b  Mal-Mir-216-P2b  Mdo-Mir-216-P2b  Mml-Mir-216-P2b  Mmr-Mir-216-P2b  Mmu-Mir-216-P2b  Mun-Mir-216-P2b  Neu-Mir-216-P2b  Oan-Mir-216-P2b  Ocu-Mir-216-P2b  Pab-Mir-216-P2b  Pbv-Mir-216-P2b  Pca-Mir-216-P2  Pma-Mir-216-P2b1  Rno-Mir-216-P2b  Sha-Mir-216-P2b  Spt-Mir-216-P2b  Sto-Mir-216-P2b  Tca-Mir-216-P2  Tgu-Mir-216-P2b  Tni-Mir-216-P2b  Tur-Mir-216-P2  Xla-Mir-216-P2b3  Xla-Mir-216-P2b4  Xtr-Mir-216-P2b 
Node of Origin (locus) Vertebrata
Node of Origin (family) Nephrozoa
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037338.1: 38640719-38640780 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P2b)		 Mir-217-v2 NC_037338.1: 38628468-38628528 [-] UCSC Ensembl
Mir-217-v1 NC_037338.1: 38628469-38628527 [-] UCSC Ensembl
Mir-216-P2b NC_037338.1: 38640719-38640780 [-] UCSC Ensembl
Mir-216-P2a NC_037338.1: 38657092-38657153 [-] UCSC Ensembl
Seed AAUCUCA
Precursor
(pre-Mir +30nt flank)		 
AGGUCUAACCUGGAUGGCUGUGAGUUGGCUUAAUCUCAGCUGGCAACUGUGAGAUGUUCAUACAGUCCUCCACAGUGGUCUCUGGGAUUAUGCUAAACAGAGCAAUCUCCUUGCCCUCAUGG
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Structure
        10             20        30        40        50         60
AGGUCUAACCUGGAUGG-----|   GAG     U         CU   A      -  AUGUUC 
                      CUGU   UUGGC UAAUCUCAG  GGC ACUGUG AG      A
                      GACA   AAUCG AUUAGGGUC  CUG UGACAC UC      U
GGUACUCCCGUUCCUCUAACGA^   ---     U         U-   G      C  CUGACA 
120       110       100           90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-216-P2b_5p
mirBase accessionMIMAT0009265
Sequence 
0- UAAUCUCAGCUGGCAACUGUGAG -23
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Proposed targets TargetScanVert: bta-miR-216a
Star sequence

Bta-Mir-216-P2b_3p*
mirBase accessionNone
Sequence 
40- CACAGUGGUCUCUGGGAUUAUG -62
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