MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-216-P2b

Family name MIR-216 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-216-P2a 
Orthologues Aae-Mir-216-P2  Aca-Mir-216-P2b  Aga-Mir-216-P2  Ami-Mir-216-P2b  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Bta-Mir-216-P2b  Cbr-Mir-216-P2  Cel-Mir-216-P2  Cfa-Mir-216-P2b  Cja-Mir-216-P2b  Cli-Mir-216-P2b  Cmi-Mir-216-P2b  Cpi-Mir-216-P2b  Cpo-Mir-216-P2b  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dno-Mir-216-P2b  Dpu-Mir-216-P2  Dre-Mir-216-P2b  Dsi-Mir-216-P2  Dya-Mir-216-P2  Ebu-Mir-216-P2b1  Eca-Mir-216-P2b  Gga-Mir-216-P2b  Gja-Mir-216-P2b  Gmo-Mir-216-P2b  Hme-Mir-216-P2  Hsa-Mir-216-P2b  Isc-Mir-216-P2  Laf-Mir-216-P2b  Lch-Mir-216-P2b  Loc-Mir-216-P2b  Mal-Mir-216-P2b  Mdo-Mir-216-P2b  Mml-Mir-216-P2b  Mmr-Mir-216-P2b  Mmu-Mir-216-P2b  Mun-Mir-216-P2b  Neu-Mir-216-P2b  Oan-Mir-216-P2b  Ocu-Mir-216-P2b  Pab-Mir-216-P2b  Pbv-Mir-216-P2b  Pca-Mir-216-P2  Pma-Mir-216-P2b1  Rno-Mir-216-P2b  Sha-Mir-216-P2b  Spt-Mir-216-P2b  Sto-Mir-216-P2b  Tca-Mir-216-P2  Tgu-Mir-216-P2b  Tni-Mir-216-P2b  Tur-Mir-216-P2  Xla-Mir-216-P2b3  Xla-Mir-216-P2b4  Xtr-Mir-216-P2b 
Node of Origin (locus) Vertebrata
Node of Origin (family) Nephrozoa
Genome context
(echTel2)		 JH980337: 15879518-15879578 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-216-P2b)		 Mir-216-P2a JH980337: 15854854-15854915 [+] UCSC
Mir-216-P2b JH980337: 15879518-15879578 [+] UCSC
Mir-217-v2 JH980337: 15887002-15887062 [+] UCSC
Mir-217-v1 JH980337: 15887003-15887061 [+] UCSC
Seed AAUCUCA
Precursor
(pre-Mir +30nt flank)		 
GGGCCCCACCUGGAUGGCUGUGGGCUGGCUUAAUCUCAGCUGGCAACUGUGAGCUGUUCGUGCAAUCCUCACAGUGGCCUCUGGGACUAUGCUACACAGAGCAAUGUCCUGCGUCCUGGAG
Get precursor sequence
Structure
        10             20        30        40        50        60
GGGCCCCACCUGGAUGG-----|    GGC    U  A      CU   A        CUGUUC 
                      CUGUG   UGGC UA UCUCAG  GGC ACUGUGAG      G
                      GACAC   AUCG AU AGGGUC  CCG UGACACUC      U
GAGGUCCUGCGUCCUGUAACGA^    ---    U  C      U-   G        CUAACG 
 .       110       100           90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ete-Mir-216-P2b_5p
mirBase accessionNone
Sequence 
0- UAAUCUCAGCUGGCAACUGUGAG -23
Get sequence
Star sequence

Ete-Mir-216-P2b_3p* (predicted)
mirBase accessionNone
Sequence 
39- CACAGUGGCCUCUGGGACUAUG -61
Get sequence