MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-216-P2b

Family name MIR-216 (all species)
Species Horse (Equus caballus)
MiRBase ID eca-mir-216a
Paralogues Eca-Mir-216-P2a 
Orthologues Aae-Mir-216-P2  Aca-Mir-216-P2b  Aga-Mir-216-P2  Ami-Mir-216-P2b  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Bta-Mir-216-P2b  Cbr-Mir-216-P2  Cel-Mir-216-P2  Cfa-Mir-216-P2b  Cja-Mir-216-P2b  Cli-Mir-216-P2b  Cmi-Mir-216-P2b  Cpi-Mir-216-P2b  Cpo-Mir-216-P2b  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dno-Mir-216-P2b  Dpu-Mir-216-P2  Dre-Mir-216-P2b  Dsi-Mir-216-P2  Dya-Mir-216-P2  Ebu-Mir-216-P2b1  Ete-Mir-216-P2b  Gga-Mir-216-P2b  Gja-Mir-216-P2b  Gmo-Mir-216-P2b  Hme-Mir-216-P2  Hsa-Mir-216-P2b  Isc-Mir-216-P2  Laf-Mir-216-P2b  Lch-Mir-216-P2b  Loc-Mir-216-P2b  Mal-Mir-216-P2b  Mdo-Mir-216-P2b  Mml-Mir-216-P2b  Mmr-Mir-216-P2b  Mmu-Mir-216-P2b  Mun-Mir-216-P2b  Neu-Mir-216-P2b  Oan-Mir-216-P2b  Ocu-Mir-216-P2b  Pab-Mir-216-P2b  Pbv-Mir-216-P2b  Pca-Mir-216-P2  Pma-Mir-216-P2b1  Rno-Mir-216-P2b  Sha-Mir-216-P2b  Spt-Mir-216-P2b  Sto-Mir-216-P2b  Tca-Mir-216-P2  Tgu-Mir-216-P2b  Tni-Mir-216-P2b  Tur-Mir-216-P2  Xla-Mir-216-P2b3  Xla-Mir-216-P2b4  Xtr-Mir-216-P2b 
Node of Origin (locus) Vertebrata
Node of Origin (family) Nephrozoa
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009162.1: 45359145-45359204 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P2b)		 Mir-216-P2a CM009162.1: 45348559-45348620 [+] UCSC Ensembl
Mir-216-P2b CM009162.1: 45359145-45359204 [+] UCSC Ensembl
Mir-217-v2 CM009162.1: 45366334-45366394 [+] UCSC Ensembl
Mir-217-v1 CM009162.1: 45366335-45366393 [+] UCSC Ensembl
Seed AAUCUCA
Precursor
(pre-Mir +30nt flank)		 
AGAUCUAACCUGGAUGGCUGUGAGUUGGUUUAAUCUCAGCUGGCAACUGUGAGAUGUUCAUAAAUCCCCACAGUGGUCUCUGGGAUUAUGCUAAACAGAGCAAUUUCCUUGCCCUCAAGG
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Structure
        10             20        30        40        50          
AGAUCUAACCUGGAUGG-----|   GAG     U         CU   A      AGAUGUUC 
                      CUGU   UUGGU UAAUCUCAG  GGC ACUGUG        \
                      GACA   AAUCG AUUAGGGUC  CUG UGACAC        A
GGAACUCCCGUUCCUUUAACGA^   ---     U         U-   G      CCCUAAAU 
.       110       100           90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
- +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-216-P2b_5p
mirBase accessionMIMAT0013072
Sequence 
0- UAAUCUCAGCUGGCAACUGUGAG -23
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Star sequence

Eca-Mir-216-P2b_3p* (predicted)
mirBase accessionNone
Sequence 
38- CACAGUGGUCUCUGGGAUUAUG -60
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