MirGeneDB ID | Hsa-Mir-216-P2b |
Family name |
MIR-216 (all species) |
Species |
Human (Homo sapiens) |
MiRBase ID |
hsa-mir-216a
|
Paralogues |
Hsa-Mir-216-P2a
|
Orthologues |
Aae-Mir-216-P2
Aca-Mir-216-P2b
Aga-Mir-216-P2
Ami-Mir-216-P2b
Asu-Mir-216-P2
Ava-Mir-216-P2
Bfl-Mir-216-P2
Bge-Mir-216-P2
Bko-Mir-216-P2
Bla-Mir-216-P2
Bpl-Mir-216-P2
Bta-Mir-216-P2b
Cbr-Mir-216-P2
Cel-Mir-216-P2
Cfa-Mir-216-P2b
Cja-Mir-216-P2b
Cli-Mir-216-P2b
Cmi-Mir-216-P2b
Cpi-Mir-216-P2b
Cpo-Mir-216-P2b
Csc-Mir-216-P2
Dan-Mir-216-P2
Dlo-Mir-216-P2
Dma-Mir-216-P2
Dme-Mir-216-P2
Dmo-Mir-216-P2
Dno-Mir-216-P2b
Dpu-Mir-216-P2
Dre-Mir-216-P2b
Dsi-Mir-216-P2
Dya-Mir-216-P2
Ebu-Mir-216-P2b1
Eca-Mir-216-P2b
Ete-Mir-216-P2b
Gga-Mir-216-P2b
Gja-Mir-216-P2b
Gmo-Mir-216-P2b
Hme-Mir-216-P2
Isc-Mir-216-P2
Laf-Mir-216-P2b
Lch-Mir-216-P2b
Loc-Mir-216-P2b
Mal-Mir-216-P2b
Mdo-Mir-216-P2b
Mml-Mir-216-P2b
Mmr-Mir-216-P2b
Mmu-Mir-216-P2b
Mun-Mir-216-P2b
Neu-Mir-216-P2b
Oan-Mir-216-P2b
Ocu-Mir-216-P2b
Pab-Mir-216-P2b
Pbv-Mir-216-P2b
Pca-Mir-216-P2
Pma-Mir-216-P2b1
Rno-Mir-216-P2b
Sha-Mir-216-P2b
Spt-Mir-216-P2b
Sto-Mir-216-P2b
Tca-Mir-216-P2
Tgu-Mir-216-P2b
Tni-Mir-216-P2b
Tur-Mir-216-P2
Xla-Mir-216-P2b3
Xla-Mir-216-P2b4
Xtr-Mir-216-P2b
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Nephrozoa
|
Genome context (hg38) |
chr2: 55988980-55989041 [-]
UCSC
Ensembl
|
Clustered miRNAs (< 50kb from Mir-216-P2b) |
Mir-217-v2
chr2: 55982983-55983043 [-]
UCSC
Ensembl
Mir-217-v1
chr2: 55982984-55983042 [-]
UCSC
Ensembl
Mir-216-P2b
chr2: 55988980-55989041 [-]
UCSC
Ensembl
Mir-216-P2a
chr2: 56000724-56000785 [-]
UCSC
Ensembl
|
Seed |
AAUCUCA |
Precursor (pre-Mir +30nt flank) |
AGGUCUAACACGGAUGGCUGUGAGUUGGCUUAAUCUCAGCUGGCAACUGUGAGAUGUUCAUACAAUCCCUCACAGUGGUCUCUGGGAUUAUGCUAAACAGAGCAAUUUCCUAGCCCUCACGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGGUCUAACACGGAUGG-----| GAG U CU A AUGUUCA
CUGU UUGGC UAAUCUCAG GGC ACUGUGAG \
GACA AAUCG AUUAGGGUC CUG UGACACUC U
AGCACUCCCGAUCCUUUAACGA^ --- U U- G CCUAACA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Dc |
Dc |
Dr |
Dr |
Xp |
Xp |
Bl |
Br |
Br |
Ce |
Ce |
Co |
Fo |
He |
Ki |
Le |
Li |
Li |
Lu |
Pa |
Pl |
Pl |
Sk |
Sk |
Sk |
Sm |
Sp |
Sp |
St |
Te |
Th |
Ut |
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Mature sequence |
Hsa-Mir-216-P2b_5p |
mirBase accession | MIMAT0000273 |
Sequence |
0- UAAUCUCAGCUGGCAACUGUGAG -23
Get sequence
|
Proposed targets |
microrna.org: MIMAT0000273
TargetScanVert: hsa-miR-216a-5p
miRDB: MIMAT0000273
|
Star sequence |
Hsa-Mir-216-P2b_3p* |
mirBase accession | MIMAT0022844 |
Sequence |
40- CACAGUGGUCUCUGGGAUUAUG -62
Get sequence
|
Proposed targets |
TargetScanVert: hsa-miR-216a-3p
miRDB: MIMAT0022844
|