MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-216-P2b1

Family name MIR-216 (all species)
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-216-P2a2 
Orthologues Aae-Mir-216-P2  Aca-Mir-216-P2b  Aga-Mir-216-P2  Ami-Mir-216-P2b  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Bta-Mir-216-P2b  Cbr-Mir-216-P2  Cel-Mir-216-P2  Cfa-Mir-216-P2b  Cja-Mir-216-P2b  Cli-Mir-216-P2b  Cmi-Mir-216-P2b  Cpi-Mir-216-P2b  Cpo-Mir-216-P2b  Csc-Mir-216-P2  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dno-Mir-216-P2b  Dpu-Mir-216-P2  Dre-Mir-216-P2b  Dsi-Mir-216-P2  Dya-Mir-216-P2  Eca-Mir-216-P2b  Ete-Mir-216-P2b  Gga-Mir-216-P2b  Gja-Mir-216-P2b  Gmo-Mir-216-P2b  Hme-Mir-216-P2  Hsa-Mir-216-P2b  Isc-Mir-216-P2  Laf-Mir-216-P2b  Lch-Mir-216-P2b  Loc-Mir-216-P2b  Mal-Mir-216-P2b  Mdo-Mir-216-P2b  Mml-Mir-216-P2b  Mmr-Mir-216-P2b  Mmu-Mir-216-P2b  Mun-Mir-216-P2b  Neu-Mir-216-P2b  Oan-Mir-216-P2b  Ocu-Mir-216-P2b  Pab-Mir-216-P2b  Pbv-Mir-216-P2b  Pca-Mir-216-P2  Pma-Mir-216-P2b1  Rno-Mir-216-P2b  Sha-Mir-216-P2b  Spt-Mir-216-P2b  Sto-Mir-216-P2b  Tca-Mir-216-P2  Tgu-Mir-216-P2b  Tni-Mir-216-P2b  Tur-Mir-216-P2  Xtr-Mir-216-P2b 
Node of Origin (locus) Cyclostomata
Node of Origin (family) Nephrozoa
Genome context
(Eburgeri_3)		 FYBX02010123.1: 688200-688261 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-216-P2b1)		 Mir-216-P2b1 FYBX02010123.1: 688200-688261 [+] UCSC Ensembl
Mir-217-P1-v2 FYBX02010123.1: 688385-688445 [+] UCSC Ensembl
Mir-217-P1-v1 FYBX02010123.1: 688386-688444 [+] UCSC Ensembl
Seed AAUCUCA
Precursor
(pre-Mir +30nt flank)		 
GCUUCUUCAAGUUAUUCUGUGUUUAUGGCUCAAUCUCAGCUGGCAACUGUGAGUUCCAUUAUGAACAACGCACGGUAGUCACUGGGAUUAGGUCGAUCACAGACAUUCGUCGCAAUGCAAAC
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Structure
        10            20        30        40        50        60 
GCUUCUUCAAGUUAUUC----|   UUUA    UC        C    A      A UUCCAUU 
                     UGUG    UGGC  AAUCUCAG UGGC ACUGUG G       \
                     ACAC    GCUG  UUAGGGUC ACUG UGGCAC C       A
CAAACGUAACGCUGCUUACAG^   UA--    GA        -    A      G AACAAGU 
120       110       100          90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Mature sequence

Ebu-Mir-216-P2b1_5p
mirBase accessionNone
Sequence 
0- CAAUCUCAGCUGGCAACUGUGAG -23
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Star sequence

Ebu-Mir-216-P2b1_3p*
mirBase accessionNone
Sequence 
40- CACGGUAGUCACUGGGAUUAGG -62
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