MirGeneDB 3.0
MirGeneDB ID

Mgi-Mir-1986

Family name MIR-1986 (all species)
Species Pacific oyster (Magallana gigas)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1986  Cte-Mir-1986  Eba-Mir-1986  Efe-Mir-1986  Hru-Mir-1986-P1  Hru-Mir-1986-P2  Lan-Mir-1986  Lgi-Mir-1986  Lhy-Mir-1986  Mom-Mir-1986  Npo-Mir-1986  Obi-Mir-1986  Ofu-Mir-1986  Ovu-Mir-1986  Pdu-Mir-1986  Pve-Mir-1986-P3  Pve-Mir-1986-P4  Pve-Mir-1986-P5  Rph-Mir-1986  War-Mir-1986 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(CGI_GCA_000297895.1)		 scaffold264: 41066-41123 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-1986)		 Mir-1990-P2 scaffold264: 40660-40717 [+] Ensembl
Mir-1986 scaffold264: 41066-41123 [+] Ensembl
Seed GGAUUUC
Precursor
(pre-Mir +30nt flank)		 
UGUAUAGAUUUAUGACUUUGUAAUUGUAUUCGCGGGUCGUGGGGAGCGCCACUGUGUCAAUCCUCGUGGAUUUCCCAAGAUCCGUGAUCACAGUUACUACUUUAUCGUCAUGCCUUUC
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Structure
        10          20        30        40        50         
UGUAUAGAUUUAUGACUUU--|       AU         G       CG    UGUGUC 
                     GUAAUUGU  UCGCGGGUC UGGGGAG  CCAC      \
                     CAUUGACA  AGUGCCUAG ACCCUUU  GGUG      A
CUUUCCGUACUGCUAUUUCAU^       CU         A       A-    CUCCUA 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
- +
A- D- D- F- L- Ea Eg Fe Gi Ha He Ju La Ma Ma Ma Pe Re Sp Um
Star sequence

Mgi-Mir-1986_5p*
mirBase accessionNone
Sequence 
0- CGCGGGUCGUGGGGAGCGCCACU -23
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Mature sequence

Mgi-Mir-1986_3p
mirBase accessionNone
Sequence 
36- UGGAUUUCCCAAGAUCCGUGAU -58
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