| MirGeneDB ID | Dgr-Mir-2-P12 |
|---|---|
| Family name | MIR-2 (all species) |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | Dgr-Mir-2-o36 Dgr-Mir-2-o37 Dgr-Mir-2-o38 Dgr-Mir-2-o39 |
| Orthologues | Agr-Mir-2-P12a Agr-Mir-2-P12b Agr-Mir-2-P12c Agr-Mir-2-P12d Agr-Mir-2-P12e Agr-Mir-2-P12f1 Agr-Mir-2-P12f2 Cte-Mir-2-P12 Efe-Mir-2-P12f Efe-Mir-2-P12g Esc-Mir-2-P12 Gsp-Mir-2 Hru-Mir-2-P12 Lgi-Mir-2-P12a Lgi-Mir-2-P12b Lgi-Mir-2-P12c Lgi-Mir-2-P12d Lgi-Mir-2-P12e Lhy-Mir-2-P12 Llo-Mir-2-P12 Mgi-Mir-2-P12 Mom-Mir-2-P12f Mom-Mir-2-P12g Mom-Mir-2-P12h Mom-Mir-2-P12i Mom-Mir-2-P12j Mom-Mir-2-P12k Npo-Mir-2-P12 Obi-Mir-2-P12 Ofu-Mir-2-P12 Ovu-Mir-2-P12 Pau-Mir-2-P12 Pdu-Mir-2-P12 Ple-Mir-2 Pve-Mir-2-P12 Rph-Mir-2-P12 War-Mir-2-P12 |
| Node of Origin (locus) | Lophotrochozoa |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000007.1: 2552989-2553045 [+] |
| Clustered miRNAs (< 50kb from Mir-2-P12) |
Mir-71
CAJFCJ010000007.1: 2552629-2552686 [+]
Mir-2-o36 CAJFCJ010000007.1: 2552877-2552934 [+] Mir-2-P12 CAJFCJ010000007.1: 2552989-2553045 [+] Mir-2-o37 CAJFCJ010000007.1: 2553124-2553185 [+] Mir-2-o38 CAJFCJ010000007.1: 2553257-2553315 [+] Mir-2-o39 CAJFCJ010000007.1: 2553392-2553451 [+] |
| Seed | AUCACAG |
| Precursor (pre-Mir +30nt flank) |
AACCAAAAGUGCUAAAUGUUCUCCAACGCACGGUUCAAGUACCUGUGGUCUGUAAUUGAGAUCAUAUCACAGCCUGCUUGGAUCAUACGUUGGUAGUUCUCUGCACUGUUGCUUUAUGet precursor sequence |
| Structure | 10 20 30 40 50 AACCAAAAGUGCUAAAUGUU- - CAC C-| C UAAU CU CCAACG GGUUCAAGUA CUGUGGU UG U GA GGUUGC CUAGGUUCGU GACACUA AC G UAUUUCGUUGUCACGUCUCUU U AUA CC^ U UAGA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Star sequence | Dgr-Mir-2-P12_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CGGUUCAAGUACCUGUGGUCUG -22
Get sequence
|
| Mature sequence | Dgr-Mir-2-P12_3p (predicted) |
| mirBase accession | None |
| Sequence |
34- UAUCACAGCCUGCUUGGAUCAUA -57
Get sequence
|
