MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-2-P12g

Family name MIR-2 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2-o20  Efe-Mir-2-o21  Efe-Mir-2-o22  Efe-Mir-2-o23  Efe-Mir-2-o24  Efe-Mir-2-P12f 
Orthologues Cte-Mir-2-P12  Dgr-Mir-2-P12  Esc-Mir-2-P12  Gsp-Mir-2  Hru-Mir-2-P12  Lhy-Mir-2-P12  Llo-Mir-2-P12  Mgi-Mir-2-P12  Mom-Mir-2-P12g  Npo-Mir-2-P12  Obi-Mir-2-P12  Ofu-Mir-2-P12  Ovu-Mir-2-P12  Pau-Mir-2-P12  Pdu-Mir-2-P12  Ple-Mir-2  Pve-Mir-2-P12  Rph-Mir-2-P12  War-Mir-2-P12 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 Efet.01.155957: 2068-2132 [+]
Clustered miRNAs
(< 50kb from Mir-2-P12g)		 Mir-71-P1 Efet.01.155957: 625-687 [+]
Mir-2-P12g Efet.01.155957: 2068-2132 [+]
Mir-2-o21 Efet.01.155957: 5781-5841 [+]
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
UGGUUACAUUCCAAAAUUCUGUUGAUGCGACAGUCCAGGUGGUUGAGAUGCGUUUCUUUUUGAAAAUGGUCGUAUCACAGCCUGCUUGGAUUAUGGCAGCAAUAGACAAGCAGCACAGCUUCUAA
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Structure
        10          20        30        40         50        60 
UGGUUACAUUCCAAAAU--       A   GAC         -|    A      UUUCUUUU 
                   UCUGUUG UGC   AGUCCAGGU GGUUG GAUGCG        U
                   AGAUAAC ACG   UUAGGUUCG CCGAC CUAUGC        G
AAUCUUCGACACGACGAAC       G   GUA         U^    A      UGGUAAAA 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Efe-Mir-2-P12g_5p*
mirBase accessionNone
Sequence 
0- CAGUCCAGGUGGUUGAGAUGCG -22
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Mature sequence

Efe-Mir-2-P12g_3p
mirBase accessionNone
Sequence 
42- UAUCACAGCCUGCUUGGAUUAUG -65
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