MirGeneDB 3.0
MirGeneDB ID

Lgi-Mir-2-P12e

Family name MIR-2 (all species)
Species Owl limpet (Lottia gigantea)
MiRBase ID
Paralogues Lgi-Mir-2-o50  Lgi-Mir-2-P12a  Lgi-Mir-2-P12b  Lgi-Mir-2-P12c  Lgi-Mir-2-P12d 
Orthologues Agr-Mir-2-P12e  Cte-Mir-2-P12  Dgr-Mir-2-P12  Esc-Mir-2-P12  Gsp-Mir-2  Hru-Mir-2-P12  Lhy-Mir-2-P12  Llo-Mir-2-P12  Mgi-Mir-2-P12  Npo-Mir-2-P12  Obi-Mir-2-P12  Ofu-Mir-2-P12  Ovu-Mir-2-P12  Pau-Mir-2-P12  Pdu-Mir-2-P12  Ple-Mir-2  Pve-Mir-2-P12  Rph-Mir-2-P12  War-Mir-2-P12 
Node of Origin (locus) L. gigantea
Node of Origin (family) Protostomia
Genome context
(Lotgi1)		 LOTGIsca_2: 4514299-4514357 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P12e)		 Mir-2-P12e LOTGIsca_2: 4514299-4514357 [-] Ensembl
Mir-2-P12d LOTGIsca_2: 4514607-4514668 [-] Ensembl
Mir-2-P12c LOTGIsca_2: 4514962-4515022 [-] Ensembl
Mir-2-P12b LOTGIsca_2: 4515157-4515217 [-] Ensembl
Mir-71 LOTGIsca_2: 4515804-4515862 [-] Ensembl
Mir-2-P12a LOTGIsca_2: 4520083-4520141 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
CGAAGGUGUGAAAAUAUUUGUGUAACUGUUCCGUCUAAGUGGUUGUGAUUAGUUUUGUUAUUUCUUAUCACAGCCUGCUUAGAUCGGCAUUGUGCACAAAAUAUCAACAAUGUUAUGCC
Get precursor sequence
Structure
        10           20        30         40         50        
CGAAGGUGUGAAAAUAU---       ACU  U   -       -|        U  UUUUG 
                    UUGUGUA   GU CCG UCUAAGU GGUUGUGAU AG     \
                    AACACGU   UA GGC AGAUUCG CCGACACUA UC     U
CCGUAUUGUAACAACUAUAA       GU-  C   U       U^        U  UUUAU 
       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Lgi-Mir-2-P12e_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCGUCUAAGUGGUUGUGAUUAG -22
Get sequence
Mature sequence

Lgi-Mir-2-P12e_3p
mirBase accessionNone
Sequence 
35- UAUCACAGCCUGCUUAGAUCGGCA -59
Get sequence