MirGeneDB 3.0

23 microRNA genes with node of origin L. gigantea
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Lgi-Mir-2-o50 lgi-mir-2c MIR-2 AUCACAG None MIMAT0009558 LOTGIsca_2 5780837 5780893 + L. gigantea Protostomia No 1
Lgi-Mir-2-P12a lgi-mir-2d MIR-2 AUCACAG None MIMAT0009559 LOTGIsca_2 4520083 4520141 + L. gigantea Protostomia No 1
Lgi-Mir-2-P12b None MIR-2 AUCACAG None None LOTGIsca_2 4515157 4515217 - L. gigantea Protostomia No 1
Lgi-Mir-2-P12c None MIR-2 AUCACAG None None LOTGIsca_2 4514962 4515022 - L. gigantea Protostomia No 1
Lgi-Mir-2-P12d None MIR-2 AUCACAG None None LOTGIsca_2 4514607 4514668 - L. gigantea Protostomia No 1
Lgi-Mir-2-P12e None MIR-2 AUCACAG None None LOTGIsca_2 4514299 4514357 - L. gigantea Protostomia No 1
Lgi-Mir-92-o28 lgi-mir-92 MIR-92 AUUGCAC None MIMAT0009574 LOTGIsca_47 46552 46607 - L. gigantea Bilateria No 1
Lgi-Mir-92-o29 V lgi-mir-92 MIR-92 AUUGCAC None MIMAT0009574 LOTGIsca_47 43373 43430 - L. gigantea Bilateria 2 No 1
Lgi-Mir-92-o30 lgi-mir-92 MIR-92 AUUGCAC None MIMAT0009574 LOTGIsca_47 43249 43304 - L. gigantea Bilateria No 1
Lgi-Mir-92-o31 lgi-mir-92 MIR-92 AUUGCAC None MIMAT0009574 LOTGIsca_47 43039 43096 - L. gigantea Bilateria No
Lgi-Mir-124-P12 lgi-mir-124 MIR-124 AAGGCAC None MIMAT0009578 LOTGIsca_15 2554528 2554585 + L. gigantea Bilateria No 1 1
Lgi-Mir-124-P13 None MIR-124 AAGGCAC None None LOTGIsca_15 2557525 2557581 + L. gigantea Bilateria No 1
Lgi-Mir-184-P5 lgi-mir-184 MIR-184 GGACGGA None MIMAT0009585 LOTGIsca_131 549624 549681 - L. gigantea Nephrozoa No 1
Lgi-Mir-184-P6 None MIR-184 GGACGGA None None LOTGIsca_131 549297 549354 - L. gigantea Nephrozoa No 1
Lgi-Mir-242-P1 lgi-mir-242b MIR-242 UGCGUAG MIMAT0009681 None LOTGIsca_16 1142985 1143041 - L. gigantea Nephrozoa Unknown
Lgi-Mir-242-P2 lgi-mir-242a MIR-242 UGCGUAG MIMAT0009590 None LOTGIsca_16 1142666 1142720 - L. gigantea Nephrozoa Unknown 1
Lgi-Mir-281-P8 lgi-mir-281 MIR-281 GUCAUGG MIMAT0009594 MIMAT0009595 LOTGIsca_7 1082934 1082990 + L. gigantea Nephrozoa No 1
Lgi-Mir-281-P9 lgi-mir-281 MIR-281 GUCAUGG MIMAT0009594 MIMAT0009595 LOTGIsca_7 642928 642984 - L. gigantea Nephrozoa No 1
Lgi-Mir-1992-P1 None MIR-1992 CAGCAGU None None LOTGIsca_253 36542 36604 - L. gigantea Platytrochozoa No 1
Lgi-Mir-1992-P2 lgi-mir-1992 MIR-1992 CAGCAGU None MIMAT0009722 LOTGIsca_253 35945 36002 - L. gigantea Platytrochozoa No 1
Lgi-Novel-1 None LGI-NOVEL-1 CAAACAU None None LOTGIsca_115 803487 803546 - L. gigantea L. gigantea No 1
Lgi-Novel-2-P1 None LGI-NOVEL-2 CCACUCA None None LOTGIsca_95 478396 478454 + L. gigantea L. gigantea No 1
Lgi-Novel-2-P2 None LGI-NOVEL-2 CCACUCA None None LOTGIsca_95 480768 480826 + L. gigantea L. gigantea No 1

(red - mature/co-mature, blue - star)

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