MirGeneDB 3.0
MirGeneDB ID

Lgi-Mir-1992-P1

Family name MIR-1992 (all species)
Species Owl limpet (Lottia gigantea)
MiRBase ID
Paralogues Lgi-Mir-1992-P2 
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) L. gigantea
Node of Origin (family) Platytrochozoa
Genome context
(Lotgi1)		 LOTGIsca_253: 36542-36604 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1992-P1)		 Mir-1992-P2 LOTGIsca_253: 35945-36002 [-] Ensembl
Mir-1992-P1 LOTGIsca_253: 36542-36604 [-] Ensembl
Seed CAGCAGU
Precursor
(pre-Mir +30nt flank)		 
UUGCACCACUGCAAUUGACGGUGAUGGGACCAGUCAGUGGAUGAUUGUUAUGAUGGCGAUGUUAUUUUAUCAGCAGUUGUACCACUGAUUGGGCUCCAUUUCUUAAAACUUCAAUCUGAUAUA
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Structure
        10         20         30        40         50        60 
UUGCACCACUGCAAUUGAC-  U      A-           -|UG     UA     GCGAU 
                    GG GAUGGG  CCAGUCAGUGG A  AUUGU  UGAUG     G
                    UC UUACCU  GGUUAGUCACC U  UGACG  ACUAU     U
AUAUAGUCUAACUUCAAAAU  U      CG           A^GU     --     UUUAU 
 120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Lgi-Mir-1992-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAGUCAGUGGAUGAUUGUUAUGAUG -25
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Mature sequence

Lgi-Mir-1992-P1_3p
mirBase accessionNone
Sequence 
39- UCAGCAGUUGUACCACUGAUUGGG -63
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