| MirGeneDB ID | Npo-Mir-1992 |
|---|---|
| Family name | MIR-1992 (all species) |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Agr-Mir-1992 Cte-Mir-1992 Dgr-Mir-1992 Eba-Mir-1992 Efe-Mir-1992-P3 Efe-Mir-1992-P4 Egr-Mir-1992 Esc-Mir-1992 Gsa-Mir-1992 Hru-Mir-1992 Lan-Mir-1992 Lgi-Mir-1992-P1 Lgi-Mir-1992-P2 Llo-Mir-1992 Mgi-Mir-1992 Mom-Mir-1992 Obi-Mir-1992 Ofu-Mir-1992 Ovu-Mir-1992 Pau-Mir-1992 Pcr-Mir-1992 Pdu-Mir-1992 Pve-Mir-1992 Rph-Mir-1992 Sma-Mir-1992 Sme-Mir-1992-P5 Sme-Mir-1992-P6-v1 Snu-Mir-1992 War-Mir-1992 |
| Node of Origin (locus) | Platytrochozoa |
| Node of Origin (family) | Platytrochozoa |
| Genome context (GCA_018389105_NPO) |
JACATO010001876.1: 280757-280818 [-] Ensembl |
| Seed | CAGCAGU |
| Precursor (pre-Mir +30nt flank) |
GAUGAAUCCAUGAAAUGAGUGCUUCCAGUCCGUCAGUGGAUGAUUGCUGGUACCCAGCACUGAACUGUAUCAGCAGUUGUACCACUGAUUUGCUGGGGGUAACUAUGGCAGCAAAACUGGUUGet precursor sequence |
| Structure | 10 20 30 40 50 GAUGAAUCCAUGAAAUG- - CC -|UG CCCAGCA AG UGCUUCCAGU GUCAGUGG A AUUGCUGGUA \ UC AUGGGGGUCG UAGUCACC U UGACGACUAU C UUGGUCAAAACGACGGUA A UU A^GU GUCAAGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Npo-Mir-1992_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CGUCAGUGGAUGAUUGCUGGUA -22
Get sequence
|
| Mature sequence | Npo-Mir-1992_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UCAGCAGUUGUACCACUGAUUUG -62
Get sequence
|
