| MirGeneDB ID | Ovu-Mir-1992 |
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| Family name |
MIR-1992 (all species) |
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| Seed |
CAGCAGU |
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| Species |
Common octopus (Octopus vulgaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cgi-Mir-1992
Cte-Mir-1992
Efe-Mir-1992-P3
Efe-Mir-1992-P4
Esc-Mir-1992
Lan-Mir-1992
Lgi-Mir-1992-P1
Lgi-Mir-1992-P2
Npo-Mir-1992
Obi-Mir-1992
Sme-Mir-1992-P5
Sme-Mir-1992-P6-v1
Sme-Mir-1992-P6-v2
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| Node of Origin (locus) |
Platytrochozoa
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| Node of Origin (family) |
Platytrochozoa
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Genome context
(GCA_003957725.1_ASM395772v1_OVU) |
RXHP01067614.1: 139572-139636 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCGAUGAUGAGAUCACUGUUCUUCGCAGCACGUCAGUGGAUGAUUGCUGGUAGUCACCAGUUUCAUACUGUAUCAGCAGUUGUACCACUGAUUUGCUGAGUUGGAUAUCUACUACAACUACCACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCGAUGAUGAGAUCACU-- UUCG C -|UG GUCACCAG
GUUC CAGCA GUCAGUGG A AUUGCUGGUA U
UAGG GUCGU UAGUCACC U UGACGACUAU U
ACACCAUCAACAUCAUCUA UUGA U A^GU GUCAUACU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
Oc |
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| Star sequence |
Ovu-Mir-1992_5p* |
| mirBase accession | None |
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| Sequence |
0- CGUCAGUGGAUGAUUGCUGGUA -22
Get sequence
|
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| Mature sequence |
Ovu-Mir-1992_3p |
| mirBase accession | None |
|---|
| Sequence |
42- UCAGCAGUUGUACCACUGAUUUG -65
Get sequence
|
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