MirGeneDB 3.0
MirGeneDB ID

Ovu-Mir-1992

Family name MIR-1992 (all species)
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Efe-Mir-1992-P3  Efe-Mir-1992-P4  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Lgi-Mir-1992-P1  Lgi-Mir-1992-P2  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Sme-Mir-1992-P5  Sme-Mir-1992-P6-v1  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_003957725.1_ASM395772v1_OVU)		 RXHP01067614.1: 139572-139636 [-] Ensembl
Seed CAGCAGU
Precursor
(pre-Mir +30nt flank)		 
CCGAUGAUGAGAUCACUGUUCUUCGCAGCACGUCAGUGGAUGAUUGCUGGUAGUCACCAGUUUCAUACUGUAUCAGCAGUUGUACCACUGAUUUGCUGAGUUGGAUAUCUACUACAACUACCACA
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Structure
        10          20        30         40        50        60 
CCGAUGAUGAGAUCACU--    UUCG     C        -|UG          GUCACCAG 
                   GUUC    CAGCA GUCAGUGG A  AUUGCUGGUA        U
                   UAGG    GUCGU UAGUCACC U  UGACGACUAU        U
ACACCAUCAACAUCAUCUA    UUGA     U        A^GU          GUCAUACU 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-1992_5p*
mirBase accessionNone
Sequence 
0- CGUCAGUGGAUGAUUGCUGGUA -22
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Mature sequence

Ovu-Mir-1992_3p
mirBase accessionNone
Sequence 
42- UCAGCAGUUGUACCACUGAUUUG -65
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