MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-1992

Family name MIR-1992 (all species)
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Efe-Mir-1992-P3  Efe-Mir-1992-P4  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Lgi-Mir-1992-P1  Lgi-Mir-1992-P2  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Sme-Mir-1992-P5  Sme-Mir-1992-P6-v1  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343006.1: 11524061-11524119 [-] Ensembl
Seed CAGCAGU
Precursor
(pre-Mir +30nt flank)		 
ACCUUGGAUGAUGAUUUUGUCGUAGCCCUCCAUCAGUGGAUGAUUGCUGGUAGUUUUAUACAAGUAUCAGCAGUUGUACCACUGAUGUGGGGACAUUGACACAGGCAGCUGGAGGACAG
Get precursor sequence
Structure
        10         20         30         40        50        
ACCUUGGAUGAUGAUUU-     UAG-   UC         -|UG          GUUUU 
                  UGUCG    CCC  CAUCAGUGG A  AUUGCUGGUA     A
                  ACAGU    GGG  GUAGUCACC U  UGACGACUAU     U
GACAGGAGGUCGACGGAC     UACA   GU         A^GU          GAACA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
No No No No No No
Star sequence

Llo-Mir-1992_5p*
mirBase accessionNone
Sequence 
0- CAUCAGUGGAUGAUUGCUGGUA -22
Get sequence
Mature sequence

Llo-Mir-1992_3p
mirBase accessionNone
Sequence 
36- UCAGCAGUUGUACCACUGAUGUG -59
Get sequence