MirGeneDB 3.0
86 Lineus longissimus microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC No No No No No No
Llo-Bantam None BANTAM GAGAUCA None None OU342992.1 20295277 20295339 - Protostomia Protostomia No
Llo-Let-7 None LET-7 GAGGUAG None None OU343009.1 14152813 14152880 - Bilateria Bilateria No 1 1 1
Llo-Mir-1 None MIR-1 GGAAUGU None None OU342995.1 23646540 23646597 + Bilateria Bilateria No 1
Llo-Mir-2-o114 V None MIR-2 CACAGCC None None OU343002.1 11598646 11598704 - Lineidae Protostomia 2 No
Llo-Mir-2-o115 None MIR-2 AUCACAG None None OU343002.1 11595818 11595877 - Lineidae Protostomia No
Llo-Mir-2-o116 None MIR-2 AUCACAG None None OU343002.1 11594484 11594542 - Lineidae Protostomia No
Llo-Mir-2-o117 None MIR-2 AUCACAG None None OU343002.1 11593640 11593697 - Lineidae Protostomia No
Llo-Mir-2-o118 None MIR-2 AUCACAG None None OU343000.1 4142445 4142502 + Lineidae Protostomia No 1
Llo-Mir-2-o119 None MIR-2 AUCACAG None None OU343000.1 4142150 4142210 + Lineidae Protostomia No
Llo-Mir-2-o120 None MIR-2 AUCACAG None None OU343000.1 4140870 4140930 + Lineidae Protostomia No 1
Llo-Mir-2-o121 None MIR-2 AUCACAG None None OU343000.1 4140571 4140629 + Lineidae Protostomia No 1 1
Llo-Mir-2-P12 None MIR-2 AUCACAG None None OU343002.1 11596059 11596116 - Lophotrochozoa Protostomia No
Llo-Mir-7 None MIR-7 GGAAGAC None None OU342993.1 10104366 10104424 + Bilateria Bilateria No 1
Llo-Mir-8 None MIR-8 AAUACUG None None OU343003.1 15857804 15857863 - Nephrozoa Nephrozoa No 1
Llo-Mir-9 None MIR-9 CUUUGGU None None OU342993.1 6082207 6082268 + Bilateria Bilateria No 1
Llo-Mir-10-P1 None MIR-10 ACCCUGU None None OU343004.1 4017495 4017554 + Bilateria Eumetazoa Unknown 1
Llo-Mir-10-P2 None MIR-10 ACCCGUA None None OU343009.1 14153136 14153194 - Bilateria Eumetazoa Unknown 1
Llo-Mir-10-P3 None MIR-10 CCCUGAG None None OU343009.1 14140565 14140619 - Bilateria Eumetazoa Unknown 1 1
Llo-Mir-10-P4 V None MIR-10 ACCCUGU None None OU343004.1 4085729 4085789 - Protostomia Eumetazoa 2 No 1 1
Llo-Mir-10-P5a V None MIR-10 UACCCUG None None OU343004.1 3860985 3861042 + Lineidae Eumetazoa 2 No 1
Llo-Mir-10-P5b V None MIR-10 ACCCUGU None None OU343004.1 3931990 3932051 + Lineidae Eumetazoa 3 No
Llo-Mir-12 None MIR-12 GAGUAUU None None OU342994.1 2295834 2295889 - Protostomia Protostomia No 1
Llo-Mir-22-P1 None MIR-22 GCUGCCU None None OU342993.1 20247149 20247205 - Bilateria Bilateria No 1
Llo-Mir-22-P2 None MIR-22 AGCUGCC None None OU342993.1 20246176 20246235 - Bilateria Bilateria No 1
Llo-Mir-29-P1 None MIR-29 AGCACCA None None OU342998.1 3860772 3860832 - Bilateria Bilateria No 1
Llo-Mir-29-P2 None MIR-29 AGCACCA None None OU342998.1 3858505 3858561 - Bilateria Bilateria No 1
Llo-Mir-31 None MIR-31 GGCAAGA None None OU342995.1 6299944 6300006 + Bilateria Bilateria No 1
Llo-Mir-33 None MIR-33 UGCAUUG None None OU343000.1 14885295 14885353 - Bilateria Bilateria Unknown 1
Llo-Mir-34 None MIR-34 GGCAGUG None None OU343009.1 15440797 15440856 - Bilateria Bilateria No
Llo-Mir-36 None MIR-36 CACCGGG None None OU343010.1 12798634 12798693 + Protostomia Protostomia No 1
Llo-Mir-71 None MIR-71 GAAAGAC None None OU343002.1 11598853 11598911 - Nephrozoa Nephrozoa No 1
Llo-Mir-76 None MIR-76 UCGUUGU None None OU343000.1 13376258 13376318 - Nephrozoa Nephrozoa No
Llo-Mir-87-o24 None MIR-87 UGAGCAA None None OU343007.1 5142453 5142511 + Lineidae Protostomia No 1
Llo-Mir-87-o25 None MIR-87 UGAGCAA None None OU343007.1 5143452 5143509 + Lineidae Protostomia No 1 1
Llo-Mir-87-o26 None MIR-87 UGAGCAA None None OU343007.1 5143736 5143795 + Lineidae Protostomia No 1 1
Llo-Mir-92-o126 None MIR-92 AUUGCAC None None OU343005.1 13161856 13161915 + Lineidae Bilateria No 1
Llo-Mir-92-o127 None MIR-92 AUUGCAC None None OU343005.1 13162175 13162233 + Lineidae Bilateria No 1
Llo-Mir-92-o128 None MIR-92 AUUGCAC None None OU343005.1 13162433 13162490 + Lineidae Bilateria No 1 1
Llo-Mir-92-o129 None MIR-92 AUUGCAC None None OU343005.1 13162806 13162859 + Lineidae Bilateria No 1
Llo-Mir-92-o130 None MIR-92 AUUGCAC None None OU343005.1 13343151 13343214 - Lineidae Bilateria No 1 1
Llo-Mir-92-o131 None MIR-92 AUUGCAC None None OU343008.1 13155416 13155475 - Lineidae Bilateria No 1 1
Llo-Mir-96-P1 None MIR-96 UUUGGCA None None OU342995.1 5845510 5845568 - Bilateria Bilateria No 1 1
Llo-Mir-96-P2 V None MIR-96 UUGGCAC None None OU342998.1 8189137 8189196 - Bilateria Bilateria 2 Unknown 1
Llo-Mir-96-P3 None MIR-96 AUGGCAC None None OU342998.1 8190036 8190096 - Bilateria Bilateria Unknown
Llo-Mir-124 None MIR-124 AAGGCAC None None OU342995.1 7123803 7123862 + Bilateria Bilateria No 1 1
Llo-Mir-133 None MIR-133 UGGUCCC None None OU342995.1 23657445 23657508 + Bilateria Bilateria No 1 1
Llo-Mir-137 None MIR-137 UAUUGCU None None OU342995.1 510633 510690 + Bilateria Bilateria No 1
Llo-Mir-153 None MIR-153 UGCAUAG None None OU343007.1 5553455 5553513 - Bilateria Bilateria No 1 1
Llo-Mir-184-P32 None MIR-184 GGACGGA None None OU343005.1 16409095 16409152 + Lineidae Nephrozoa No 1
Llo-Mir-184-P33 None MIR-184 GGACGGA None None OU343005.1 16409341 16409398 + Lineidae Nephrozoa No 1
Llo-Mir-184-P34 None MIR-184 GGACGGA None None OU343005.1 16409690 16409745 + Lineidae Nephrozoa No 1 1
Llo-Mir-184-P35 None MIR-184 GGACGGA None None OU343005.1 16409941 16409997 + Lineidae Nephrozoa No 1
Llo-Mir-184-P36 None MIR-184 GGACGGA None None OU343005.1 16410110 16410168 + Lineidae Nephrozoa No 1
Llo-Mir-184-P37 None MIR-184 GGACGGA None None OU343005.1 16406366 16406422 + Lineidae Nephrozoa No 1 1
Llo-Mir-184-P38 None MIR-184 GGACGGA None None OU343005.1 1398286 1398342 + Lineidae Nephrozoa No 1
Llo-Mir-184-P39 None MIR-184 GGACGGA None None OU343005.1 1398618 1398675 + Lineidae Nephrozoa No 1
Llo-Mir-184-P40 None MIR-184 GGACGGA None None OU343005.1 1398913 1398972 + Lineidae Nephrozoa No 1
Llo-Mir-190-P22 None MIR-190 GAUAUGU None None OU343005.1 14856451 14856507 - Lineidae Bilateria Unknown 1
Llo-Mir-190-P23 None MIR-190 GAUAUGU None None OU343005.1 14857902 14857959 - Lineidae Bilateria Unknown 1
Llo-Mir-193-P2 V None MIR-193 CAAUGCC None None OU342992.1 20512925 20512980 - Bilateria Bilateria 2 No 1
Llo-Mir-210 None MIR-210 UCACUGU None None OU342999.1 3198983 3199041 + Bilateria Bilateria No 1 1
Llo-Mir-216-P2c None MIR-216 AAUCUCA None None OU342994.1 2298977 2299034 - Lophotrochozoa Nephrozoa Unknown 1 1
Llo-Mir-216-P2d None MIR-216 AAUCUCA None None OU342994.1 2298218 2298276 - Lophotrochozoa Nephrozoa Unknown
Llo-Mir-219 None MIR-219 GAACUGU None None OU343008.1 15315245 15315304 - Bilateria Bilateria No 1
Llo-Mir-252-P1 None MIR-252 UAAGUAG None None OU342997.1 3154525 3154582 + Bilateria Bilateria No
Llo-Mir-252-P2 None MIR-252 UAAGUAC None None OU342997.1 3159384 3159443 + Bilateria Bilateria Unknown 1
Llo-Mir-277 None MIR-277 AAAUGCA None None OU343009.1 15441204 15441260 - Protostomia Protostomia No 1
Llo-Mir-278-P6 None MIR-278 CGGUGGG None None OU342993.1 21374766 21374826 - Lineidae Bilateria No 1
Llo-Mir-278-P7 None MIR-278 CGGUGGG None None OU342993.1 21374352 21374408 - Lineidae Bilateria No 1
Llo-Mir-279 None MIR-279 GACUAGA None None OU343010.1 12778034 12778088 + Protostomia Protostomia No 1
Llo-Mir-281 None MIR-281 GUCAUGG None None OU343004.1 3663408 3663465 + Nephrozoa Nephrozoa No 1
Llo-Mir-315 None MIR-315 UUUGAUU None None OU342998.1 4894997 4895055 - Nephrozoa Nephrozoa Unknown 1
Llo-Mir-317 None MIR-317 GAACACA None None OU343009.1 15441595 15441661 - Protostomia Protostomia No 1
Llo-Mir-375 None MIR-375 UUGUUCG None None OU343007.1 4732890 4732945 + Nephrozoa Nephrozoa No 1
Llo-Mir-750 None MIR-750 CAGAUCU None None OU342995.1 19395566 19395626 + Protostomia Protostomia No
Llo-Mir-1175 None MIR-1175 GAGAUUC None None OU342995.1 19397812 19397872 + Protostomia Protostomia No 1
Llo-Mir-1989 None MIR-1989 CAGCUGU None None OU342999.1 4092671 4092723 + Platytrochozoa Platytrochozoa Unknown
Llo-Mir-1992 None MIR-1992 CAGCAGU None None OU343006.1 11524061 11524119 - Platytrochozoa Platytrochozoa No 1
Llo-Mir-1993 None MIR-1993 AUUAUGC None None OU342995.1 5589774 5589834 - Protostomia Protostomia No 1
Llo-Mir-1994 None MIR-1994 GAGACAG None None OU343003.1 14179230 14179287 - Lophotrochozoa Lophotrochozoa No 1
Llo-Mir-2001 None MIR-2001 UGUGACC None None OU342997.1 3150196 3150254 + Bilateria Bilateria Unknown
Llo-Novel-1 V None LLO-NOVEL-1 UGACCAU None None OU342993.1 7380440 7380501 + Lineidae Lineidae 2 No 1
Llo-Novel-2 V None LLO-NOVEL-2 GGACUAU None None OU342993.1 9863718 9863780 - Lineidae Lineidae 2 No 1
Llo-Novel-3 None LLO-NOVEL-3 CAAUAUC None None OU342998.1 9077011 9077071 + Lineidae Lineidae No
Llo-Novel-4 None LLO-NOVEL-4 GACACAG None None OU343003.1 13894278 13894337 - Lineidae Lineidae No
Llo-Novel-5 None LLO-NOVEL-5 GCCGCAU None None OU343009.1 11200654 11200715 + Lineidae Lineidae No 1

(red - mature/co-mature, blue - star)

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