MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-87-o26

Family name MIR-87 (all species)
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-87-o24  Llo-Mir-87-o25 
Orthologues Gsp-Mir-87  Sne-Mir-87 
Node of Origin (locus) Lineidae
Node of Origin (family) Protostomia
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343007.1: 5143736-5143795 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-o26)		 Mir-87-o24 OU343007.1: 5142453-5142511 [+] Ensembl
Mir-87-o25 OU343007.1: 5143452-5143509 [+] Ensembl
Mir-87-o26 OU343007.1: 5143736-5143795 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
UUUUUACAGAAGAUUUUGCCAAUGUUGGUCGUGCCUGAGAUUUUCGCUCUGACCUGAAUUUACGAGAGGUGAGCAAAGUUUCAGGUGUGACUGACAGCUAGCACCAUCACCCUGAGACAA
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Structure
        10         20         30        40        50        60 
UUUUUACAGAAGAUUUU-  CAA-|  UG    UG           C    UG    GAAUU 
                  GC    UGU  GUCG  CCUGAGAUUUU GCUC  ACCU     \
                  CG    ACA  CAGU  GGACUUUGAAA CGAG  UGGA     U
AACAGAGUCCCACUACCA  AUCG^  GU    GU           -    --    GAGCA 
.       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
No No No No No No
Star sequence

Llo-Mir-87-o26_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGCCUGAGAUUUUCGCUCUGACCU -25
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Mature sequence

Llo-Mir-87-o26_3p
mirBase accessionNone
Sequence 
38- GUGAGCAAAGUUUCAGGUGUGA -60
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