MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-87-o24

Family name MIR-87 (all species)
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-87-o25  Llo-Mir-87-o26 
Orthologues Gsp-Mir-87  Sne-Mir-87 
Node of Origin (locus) Lineidae
Node of Origin (family) Protostomia
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343007.1: 5142453-5142511 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-87-o24)		 Mir-87-o24 OU343007.1: 5142453-5142511 [+] Ensembl
Mir-87-o25 OU343007.1: 5143452-5143509 [+] Ensembl
Mir-87-o26 OU343007.1: 5143736-5143795 [+] Ensembl
Seed UGAGCAA
Precursor
(pre-Mir +30nt flank)		 
GAAGAGGAAGAAGAUGACAUCAUGUUGGUCAUGCCUGAAAUUUUCGCUCGGACCUGUAUUAAAAAAGGUGAGCAAAGUUUCAGGUGUGAUUAAUAGAUGGCACUGCAUCUGGAUCUGUG
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Structure
        10           20        30        40        50        60
GAAGAGGAAGAAGAUGA---|   A                      C    GG    GUAU 
                    CAUC UGUUGGUCAUGCCUGAAAUUUU GCUC  ACCU    U
                    GUAG AUAAUUAGUGUGGACUUUGAAA CGAG  UGGA    A
GUGUCUAGGUCUACGUCACG^   -                      -    --    AAAA 
       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
No No No No No No
Star sequence

Llo-Mir-87-o24_5p* (predicted)
mirBase accessionNone
Sequence 
0- AUGCCUGAAAUUUUCGCUCGGACCU -25
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Mature sequence

Llo-Mir-87-o24_3p
mirBase accessionNone
Sequence 
37- GUGAGCAAAGUUUCAGGUGUGA -59
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