MirGeneDB 3.0
MirGeneDB ID

Llo-Novel-4

Family name LLO-NOVEL-4 (all species)
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) Lineidae
Node of Origin (family) Lineidae
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343003.1: 13894278-13894337 [-] Ensembl
Seed GACACAG
Precursor
(pre-Mir +30nt flank)		 
GGAAGUUGGUGGAAAUCUGCGCGCGCGGGCACUGGUCACAAACUGUGUCCCAAAUCCAUCUAAAAUUGUGACACAGUUUGUUACGAGUACUCGCGUCCGCAUGGGCGAUGACGUCAUCAC
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Structure
        10          20        30        40        50         
GGAAGUUGGUGGAAAUC--|   C       C   G  C            C  AAUCCA 
                   UGCG GCGCGGG ACU GU ACAAACUGUGUC CA      U
                   ACGC UGCGCUC UGA CA UGUUUGACACAG GU      C
CACUACUGCAGUAGCGGGU^   C       A   G  U            U  UAAAAU 
.       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsNo
Tissue expression
- +
No No No No No No
Star sequence

Llo-Novel-4_5p*
mirBase accessionNone
Sequence 
0- ACUGGUCACAAACUGUGUCCCA -22
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Mature sequence

Llo-Novel-4_3p
mirBase accessionNone
Sequence 
38- UGACACAGUUUGUUACGAGUAC -60
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