MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-92-o126

Family name MIR-92 (all species)
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-92-o127  Llo-Mir-92-o128  Llo-Mir-92-o129  Llo-Mir-92-o130  Llo-Mir-92-o131 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) Lineidae
Node of Origin (family) Bilateria
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343005.1: 13161856-13161915 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-o126)		 Mir-92-o126 OU343005.1: 13161856-13161915 [+] Ensembl
Mir-92-o127 OU343005.1: 13162175-13162233 [+] Ensembl
Mir-92-o128 OU343005.1: 13162433-13162490 [+] Ensembl
Mir-92-o129 OU343005.1: 13162806-13162859 [+] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
UCCUGGAUUAGGAAAAUCGGUUUUCGAUGCAGGUCUUGAAGAGUGCAACUUUGUAUAAUGAAAUAUCAAAUUGCACUCGUCCCGGCCUGCAUUUGGUACCACAAAGCUACGACAAUAGGA
Get precursor sequence
Structure
        10          20        30        40        50          
UCCUGGAUUAGGAAAAUC--|  U UC          UU  A        C    UAUAAU 
                    GGU U  GAUGCAGGUC  GA GAGUGCAA UUUG      \
                    CCA G  UUACGUCCGG  CU CUCACGUU AAAC      G
AGGAUAACAGCAUCGAAACA^  U GU          CC  G        -    UAUAAA 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
No No No No No No
Star sequence

Llo-Mir-92-o126_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUCUUGAAGAGUGCAACUUUG -23
Get sequence
Mature sequence

Llo-Mir-92-o126_3p
mirBase accessionNone
Sequence 
38- AAUUGCACUCGUCCCGGCCUGC -60
Get sequence