MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-1992-P3

Family name MIR-1992 (all species)
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-1992-P4 
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) E. fetida
Node of Origin (family) Platytrochozoa
Genome context
(Efe_combined)		 Efet.01.192781: 1365-1426 [-]
Seed CAGCAGU
Precursor
(pre-Mir +30nt flank)		 
AUUAUAUGACGCAGCUGAGAGCUUAAUCGCAGCAGUGGAUGACUACUGGUAGUUAUUUUAGACUAACCUAUCAGCAGUUAUACCACUGAUGUGCUAGAGCGUCGGAUUCGACUCCCCACCAA
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Structure
        10         20         30         40        50          
AUUAUAUGACGCAGCUGA-  -    AAU    G      -|     A      GUUAUUUU 
                   GA GCUU   CGCA CAGUGG AUGACU CUGGUA        \
                   CU CGAG   GUGU GUCACC UAUUGA GACUAU        A
AACCACCCCUCAGCUUAGG  G    AUC    A      A^     C      CCAAUCAG 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Efe-Mir-1992-P3_5p*
mirBase accessionNone
Sequence 
0- AGCAGUGGAUGACUACUGGUA -21
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Mature sequence

Efe-Mir-1992-P3_3p
mirBase accessionNone
Sequence 
40- UCAGCAGUUAUACCACUGAUGU -62
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