MirGeneDB 3.0
MirGeneDB ID

Lgi-Mir-281-P9

Family name MIR-281 (all species)
Species Owl limpet (Lottia gigantea)
MiRBase ID lgi-mir-281
Paralogues Lgi-Mir-281-P8 
Orthologues Aae-Mir-281  Aga-Mir-281  Agr-Mir-281  Asu-Mir-281  Bfl-Mir-281  Bge-Mir-281  Bko-Mir-281  Bla-Mir-281  Bpl-Mir-281  Cin-Mir-281  Csc-Mir-281  Cte-Mir-281  Dgr-Mir-281  Dlo-Mir-281  Dma-Mir-281  Dpu-Mir-281  Eba-Mir-281  Ebu-Mir-281  Egr-Mir-281  Esc-Mir-281  Gsa-Mir-281  Hme-Mir-281  Hru-Mir-281  Isc-Mir-281  Lhy-Mir-281  Llo-Mir-281  Mgi-Mir-281  Mom-Mir-281  Npo-Mir-281  Obi-Mir-281  Ofu-Mir-281  Ovu-Mir-281  Pca-Mir-281  Pcr-Mir-281  Pdu-Mir-281  Pfl-Mir-281  Rph-Mir-281  Sko-Mir-281  Sma-Mir-281  Sme-Mir-281  Snu-Mir-281  Sto-Mir-281  Tca-Mir-281  Tur-Mir-281  War-Mir-281 
Node of Origin (locus) L. gigantea
Node of Origin (family) Nephrozoa
Genome context
(Lotgi1)		 LOTGIsca_7: 642928-642984 [-] Ensembl
Seed GUCAUGG
Precursor
(pre-Mir +30nt flank)		 
UCGAUUUUCAAGAUUCAAGAUCAAACGAUGAAGGGAGCAUCUGUCGACAGUUUGAAUUUAAAUACUGUCAUGGAGUUGCUCUCUUUACCGGGUUGGUCAAAUUCACCGAAAGUAAGU
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Structure
        10         20         30          40        50       
UCGAUUUUCAAGAUUCAA-      A-  A           --|    C      UUGAA 
                   GAUCAA  CG UGAAGGGAGCA  UCUGU GACAGU     U
                   CUGGUU  GC AUUUCUCUCGU  AGGUA CUGUCA     U
UGAAUGAAAGCCACUUAAA      GG  C           UG^    -      UAAAU 
     110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Lgi-Mir-281-P9_5p* (predicted)
mirBase accessionMIMAT0009594
Sequence 
0- AAGGGAGCAUCUGUCGACAGU -21
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Mature sequence

Lgi-Mir-281-P9_3p
mirBase accessionMIMAT0009595
Sequence 
35- UGUCAUGGAGUUGCUCUCUUUA -57
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