MirGeneDB

MirGeneDB ID

Lgi-Mir-184-P6

Family name MIR-184 (all species)
Seed GGACGGA
Species Owl limpet (Lottia gigantea)
MiRBase ID
Paralogues Lgi-Mir-184-P5 
Orthologues Aae-Mir-184  Aca-Mir-184  Ami-Mir-184  Asu-Mir-184  Bfl-Mir-184  Bge-Mir-184  Bta-Mir-184  Cfa-Mir-184  Cin-Mir-184  Cli-Mir-184  Cpi-Mir-184  Cpo-Mir-184  Dan-Mir-184  Dme-Mir-184  Dmo-Mir-184  Dno-Mir-184  Dpu-Mir-184  Ete-Mir-184  Gga-Mir-184  Hme-Mir-184  Hsa-Mir-184  Isc-Mir-184  Lan-Mir-184  Mdo-Mir-184  Mml-Mir-184  Mmu-Mir-184  Oan-Mir-184  Ocu-Mir-184  Pfl-Mir-184  Pmi-Mir-184  Rno-Mir-184  Sha-Mir-184  Sko-Mir-184  Spu-Mir-184  Sto-Mir-184  Tca-Mir-184  Tgu-Mir-184  Xtr-Mir-184 
Node of Origin (locus) L. gigantea
Node of Origin (family) Bilateria
Genome context
(Lotgi1)
LOTGIsca_131: 549297-549354 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUAAGACUAAGACAUACGUAACACGUUUCCUUGUCACUCCUUCGUCUCGUCUAUAAUAGAGAACUGGACGGAGAACUGAUAAGGGCUUGUGGGUAACACUACUUCCAUUGCUACAU
Get precursor sequence
Structure
        10        20          30        40        50        
AUGUAAGACUAAGACAUACGUAA--|   UU         CUC        C  CUAUA 
                         CACG  UCCUUGUCA   CUUCGUCU GU     A
                         GUGU  GGGAAUAGU   GAGGCAGG CA     U
UACAUCGUUACCUUCAUCACAAUGG^   UC         CAA        U  AGAGA 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Lgi-Mir-184-P6_5p* (predicted)

MirBase accessionNone
Sequence
0- CCUUGUCACUCCUUCGUCUCGU -22
Get sequence
Mature sequence

Lgi-Mir-184-P6_3p

MirBase accessionNone
Sequence
36- UGGACGGAGAACUGAUAAGGGC -58
Get sequence