MirGeneDB 3.0
MirGeneDB ID

Mom-Mir-2-P12k

Family name MIR-2 (all species)
Species Mossy chiton (Mopalia muscosa)
MiRBase ID
Paralogues Mom-Mir-2-o85-v1  Mom-Mir-2-o86  Mom-Mir-2-o88  Mom-Mir-2-o89  Mom-Mir-2-P12f  Mom-Mir-2-P12g  Mom-Mir-2-P12h  Mom-Mir-2-P12i  Mom-Mir-2-P12j 
Orthologues Cte-Mir-2-P12  Dgr-Mir-2-P12  Esc-Mir-2-P12  Gsp-Mir-2  Hru-Mir-2-P12  Lhy-Mir-2-P12  Llo-Mir-2-P12  Mgi-Mir-2-P12  Npo-Mir-2-P12  Obi-Mir-2-P12  Ofu-Mir-2-P12  Ovu-Mir-2-P12  Pau-Mir-2-P12  Pdu-Mir-2-P12  Ple-Mir-2  Pve-Mir-2-P12  Rph-Mir-2-P12  War-Mir-2-P12 
Node of Origin (locus) M. mucosa
Node of Origin (family) Protostomia
Genome context
(GCA_031763545.1_ASM3176354v1_genomic_Mom)		 JARFOD010082610.1: 4334-4391 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P12k)		 Mir-2-P12g JARFOD010082610.1: 1081-1137 [+] Ensembl
Mir-2-P12h JARFOD010082610.1: 1295-1352 [+] Ensembl
Mir-2-P12i JARFOD010082610.1: 1780-1835 [+] Ensembl
Mir-2-P12j JARFOD010082610.1: 1936-1992 [+] Ensembl
Mir-2-P12f JARFOD010082610.1: 4203-4260 [+] Ensembl
Mir-2-P12k JARFOD010082610.1: 4334-4391 [+] Ensembl
Seed AUCACAG
Precursor
(pre-Mir +30nt flank)		 
CAAUGAAUACAGCCUCCUAUUUUAUGUUUCUGACCAAGUGGUUGUGAUCUGUAUGCUACAGUUCAUAUCACAGCCUGCUUGGAUCAGUAUCAUGACAGGAAAAUCUGCAGUAAUUAGU
Get precursor sequence
Structure
        10        20          30          40        50       
CAAUGAAUACAGCCUCCUAUU--     UUU    -      -|        C  UAUGC 
                       UUAUG   CUGA CCAAGU GGUUGUGAU UG     U
                       AGUAC   GACU GGUUCG CCGACACUA AC     A
UGAUUAAUGACGUCUAAAAGGAC     UAU    A      U^        U  UUGAC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Mom-Mir-2-P12k_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGACCAAGUGGUUGUGAUCUG -21
Get sequence
Mature sequence

Mom-Mir-2-P12k_3p
mirBase accessionNone
Sequence 
35- UAUCACAGCCUGCUUGGAUCAGU -58
Get sequence