MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-1990-P2e

Family name MIR-1990 (all species)
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-1990-P2a1  Pve-Mir-1990-P2a2  Pve-Mir-1990-P2b  Pve-Mir-1990-P2c  Pve-Mir-1990-P2d 
Orthologues Agr-Mir-1990-P2  Cte-Mir-1990-P2  Cte-Mir-1990-P2-as  Eba-Mir-1990-P2  Efe-Mir-1990-P2  Hru-Mir-1990-P2  Lan-Mir-1990-P2  Lgi-Mir-1990-P2  Mgi-Mir-1990-P2  Mom-Mir-1990-P2  Npo-Mir-1990-P2  Ofu-Mir-1990-P2  Pdu-Mir-1990-P2  Pdu-Mir-1990-P2-as  Rph-Mir-1990-P2  War-Mir-1990-P2 
Node of Origin (locus) Dentaliidae
Node of Origin (family) Lophotrochozoa
Genome context
(Pve_genome_chr_only)		 Pve_Chr2: 352798096-352798154 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-1990-P2e)		 Mir-1990-P2e Pve_Chr2: 352798096-352798154 [-] Ensembl
Mir-1990-P2d Pve_Chr2: 352800222-352800278 [-] Ensembl
Mir-1986-P5 Pve_Chr2: 352801286-352801343 [-] Ensembl
Mir-1986-P4 Pve_Chr2: 352801964-352802022 [-] Ensembl
Mir-1990-P2c Pve_Chr2: 352803059-352803115 [-] Ensembl
Mir-1990-P2b Pve_Chr2: 352803736-352803791 [-] Ensembl
Seed GUAAGUU
Precursor
(pre-Mir +30nt flank)		 
AUGGAAGAAGAGAUAAGCUAGUGCAUGUGCAGUAAGUUGUUGGGGUCCCUGAUGCUUUUCGUUAGUCAGGGAUUACUUCAACUACCCGCACAAGUGUCAUUGCAGAUCAACAAUGGAAC
Get precursor sequence
Structure
        10        20           30         40        50         
AUGGAAGAAGAGAUAAGCU    -  --     A-|  A    UUGG         UGCUUU 
                   AGUG CA  UGUGC  GUA GUUG    GGUCCCUGA      \
                   UUAC GU  ACACG  CAU CAAC    UUAGGGACU      U
CAAGGUAACAACUAGACG-    U  GA     CC^  -    UUCA         GAUUGC 
       110        100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
To
Mature sequence

Pve-Mir-1990-P2e_5p
mirBase accessionNone
Sequence 
0- AGUAAGUUGUUGGGGUCCCUGA -22
Get sequence
Co-mature sequence

Pve-Mir-1990-P2e_3p
mirBase accessionNone
Sequence 
37- AGGGAUUACUUCAACUACCCGC -59
Get sequence