MirGeneDB 3.0
MirGeneDB ID

Lhy-Mir-92-o108

Family name MIR-92 (all species)
Species Laevipilina (Monoplacophora) (Laevipilina hyalina)
MiRBase ID
Paralogues Lhy-Mir-92-o103  Lhy-Mir-92-o104  Lhy-Mir-92-o105  Lhy-Mir-92-o106  Lhy-Mir-92-o107 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) L. hyalina
Node of Origin (family) Bilateria
Genome context
(Mono_atcgn_nospaces)		 scaffold529593_49.1: 3118-3176 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-92-o108)		 Mir-92-o108 scaffold529593_49.1: 3118-3176 [-] Ensembl
Mir-92-o107 scaffold529593_49.1: 3839-3899 [-] Ensembl
Mir-92-o106 scaffold529593_49.1: 4739-4795 [-] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
AUUUUUUGUCGCAUACCUCGUGAUUUGUUUAGGCUGUGCCGUGUGCAGUAUUUGUUGUAAAAAGUCAAAUUGCACUCGUCCCGGCCUGCACUAGCACGUGAAAUCUACAAAUGCUUGAU
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Structure
        10           20        30        40        50          
AUUUUUUGUCGCAUACCU---|   AUUU  U       UGC  U       AU   UUGUA 
                     CGUG    GU UAGGCUG   CG GUGCAGU  UUG     \
                     GCAC    CA GUCCGGC   GC CACGUUA  AAC     A
UAGUUCGUAAACAUCUAAAGU^   GAU-  C       CCU  U       --   UGAAA 
       110       100         90        80        70
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as oLhyans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Lhy-Mir-92-o108_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGCUGUGCCGUGUGCAGUAUUUG -24
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Mature sequence

Lhy-Mir-92-o108_3p
mirBase accessionNone
Sequence 
37- AAUUGCACUCGUCCCGGCCUGC -59
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