MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-92-P2d

Family name MIR-92 (all species)
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-92-P1a  Ete-Mir-92-P1c  Ete-Mir-92-P1d  Ete-Mir-92-P2a  Ete-Mir-92-P2c 
Orthologues Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2d  Cel-Mir-92  Cfa-Mir-92-P2d  Cja-Mir-92-P2d  Cmi-Mir-92-P2d  Cpo-Mir-92-P2d  Dno-Mir-92-P2d  Dre-Mir-92-P2d  Eca-Mir-92-P2d  Esc-Mir-92  Gmo-Mir-92-P2d  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P2d  Isc-Mir-92  Laf-Mir-92-P2d  Lch-Mir-92-P2d  Loc-Mir-92-P2d  Mal-Mir-92-P2d  Mdo-Mir-92-P2d  Mml-Mir-92-P2d  Mmr-Mir-92-P2d  Mmu-Mir-92-P2d  Oan-Mir-92-P2d  Obi-Mir-92  Ocu-Mir-92-P2d  Pab-Mir-92-P2d  Rno-Mir-92-P2d  Sha-Mir-92-P2d  Sme-Mir-92  Tni-Mir-92-P2d  Xla-Mir-92-P2d3  Xla-Mir-92-P2d4  Xtr-Mir-92-P2d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(echTel2)		 JH980314: 10057391-10057450 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-92-P2d)		 Mir-92-P2d JH980314: 10057391-10057450 [-] UCSC
Mir-17-P4d JH980314: 10057600-10057660 [-] UCSC
Mir-17-P1d JH980314: 10057777-10057838 [-] UCSC
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
AGCUGAACACCGGGACUGGCCAGUGUUGAGAGGCGGAGACUUGGGCAAUUGCUGGACGCUGCCCUGGGCAUUGCACUUGUCUCGGUCUGACAGUGCCGGCCCAACACUGCAGAUAUUUGG
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Structure
        10          20        30        40         50          
AGCUGAACACCGGGACU--|   A UG   AG    G     UU  -     U   GGACGC 
                   GGCC G  UUG  AGGC GAGAC  GG GCAAU GCU      \
                   CCGG C  GAC  UCUG CUCUG  UC CGUUA CGG      U
GGUUUAUAGACGUCACAAC^   C GU   AG    G     U-  A     -   GUCCCG 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
To
Star sequence

Ete-Mir-92-P2d_5p*
mirBase accessionNone
Sequence 
0- AGGCGGAGACUUGGGCAAUUGCU -23
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Mature sequence

Ete-Mir-92-P2d_3p
mirBase accessionNone
Sequence 
38- CAUUGCACUUGUCUCGGUCUGA -60
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