MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-92-P9

Family name MIR-92 (all species)
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-92-P10  Lpo-Mir-92-P11 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sko-Mir-92-o9  Sme-Mir-92 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013669128.1: 56053-56112 [+] Ensembl
Seed AUUGCAC
Precursor
(pre-Mir +30nt flank)		 
UUCGAAGCAAAACAAGAUUGAACCUAAGGUAGGUCAGAAUGAGUGACAGUGUUGAGCUAAUGAAAGAAUAUUGCACUCGUCCCGGCCUAUCUUGGGAACUGCUAAUUCAACAGAUACGUU
Get precursor sequence
Structure
        10        20          30        40        50          
UUCGAAGCAAAACAAGAUUGAA--|            AGA       A       GAGCUA 
                        CCUAAGGUAGGUC   AUGAGUG CAGUGUU      \
                        GGGUUCUAUCCGG   UGCUCAC GUUAUAA      A
UUGCAUAGACAACUUAAUCGUCAA^            CCC       -       GAAAGU 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
- +
Ge Ge So So So To
Star sequence

Lpo-Mir-92-P9_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUCAGAAUGAGUGACAGUGUU -23
Get sequence
Mature sequence

Lpo-Mir-92-P9_3p
mirBase accessionNone
Sequence 
38- UAUUGCACUCGUCCCGGCCUAU -60
Get sequence