MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-92-P2c

Family name MIR-92 (all species)
Seed AUUGCAC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-92-P1a  Cmi-Mir-92-P1b  Cmi-Mir-92-P1c  Cmi-Mir-92-P1d  Cmi-Mir-92-P2a  Cmi-Mir-92-P2b  Cmi-Mir-92-P2d 
Orthologues Aca-Mir-92-P2c  Ami-Mir-92-P2c  Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2c  Cel-Mir-92  Cfa-Mir-92-P2c  Cli-Mir-92-P2c  Cpi-Mir-92-P2c  Cpo-Mir-92-P2c  Dno-Mir-92-P2c  Dre-Mir-92-P2c  Esc-Mir-92  Ete-Mir-92-P2c  Gga-Mir-92-P2c  Gja-Mir-92-P2c  Gmo-Mir-92-P2c  Hsa-Mir-92-P2c  Isc-Mir-92  Lch-Mir-92-P2c  Loc-Mir-92-P2c  Mdo-Mir-92-P2c  Mml-Mir-92-P2c  Mmu-Mir-92-P2c  Mun-Mir-92-P2c  Oan-Mir-92-P2c  Obi-Mir-92  Ocu-Mir-92-P2c  Pbv-Mir-92-P2c  Rno-Mir-92-P2c  Sha-Mir-92-P2c  Sme-Mir-92  Spt-Mir-92-P2c  Sto-Mir-92-P2c  Tgu-Mir-92-P2c  Xla-Mir-92-P2c3  Xla-Mir-92-P2c4  Xtr-Mir-92-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635856.1: 9594643-9594704 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUUAUUGUUUUAUUAGUCUUGCUGUUGUCGGGUGGAUCACGAUGCAAUUUUGAUUCUUUUUGCUGUAAAAUUGCACGGUAUCCAUCUGUAAUCCGCAGGACAUUCGUCGCUUGAUGGGGC
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Structure
        10          20         30        40        50        60 
AUCUUAUUGUUUUAUUA--       U-|   U         CA  A         GAUUCUU 
                   GUCUUGC  GUUG CGGGUGGAU  CG UGCAAUUUU       \
                   CAGGACG  UAAU GUCUACCUA  GC ACGUUAAAA       U
CGGGGUAGUUCGCUGCUUA       CC^   -         UG  -         UGUCGUU 
120       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Star sequence

Cmi-Mir-92-P2c_5p*
mirBase accessionNone
Sequence 
0- CGGGUGGAUCACGAUGCAAUUUU -23
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Mature sequence

Cmi-Mir-92-P2c_3p
mirBase accessionNone
Sequence 
40- AAUUGCACGGUAUCCAUCUGUA -62
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