MirGeneDB 3.0
248 Tetraodon nigroviridis microRNA genes
Sort by genome coordinates Motifs Tissue expression
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MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC Sp Sp Sp To
Tni-Let-7-P1b1 tni-let-7d LET-7 GAGGUAG MIMAT0002996 None 8 6075965 6076034 - Clupeocephala Bilateria Unknown 1
Tni-Let-7-P1b2 None LET-7 GAGGUAG None None 21_random 1794498 1794567 + Clupeocephala Bilateria Unknown 1
Tni-Let-7-P1d1 None LET-7 GAGGUAG None None 16 8250022 8250088 - Clupeocephala Bilateria No
Tni-Let-7-P1d2 tni-let-7a-1 LET-7 GAGGUAG MIMAT0002929 None 7 5619183 5619249 - Clupeocephala Bilateria No
Tni-Let-7-P2a2a None LET-7 GAGGUAG None None 19 5327786 5327856 - Clupeocephala Bilateria Yes
Tni-Let-7-P2a2b tni-let-7a-2 LET-7 GAGGUAG MIMAT0002929 None 13 9220402 9220473 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2a3a tni-let-7g LET-7 GAGGUAG MIMAT0003098 None 9 3596162 3596232 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2a3b None LET-7 GAGGUAG None None 9 10380214 10380284 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2a4a tni-let-7e LET-7 GAGGUAG MIMAT0002899 None 9 4666605 4666677 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2a4b None LET-7 GAGGUAG None None 11 8661962 8662032 - Clupeocephala Bilateria Yes 1
Tni-Let-7-P2b2a tni-let-7b LET-7 GAGGUAG MIMAT0003017 None 19 5327500 5327575 - Clupeocephala Bilateria Yes 1
Tni-Let-7-P2b2b None LET-7 GAGGUAG None None 13 9220791 9220866 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2b3a tni-let-7h LET-7 GAGGUAG MIMAT0002893 None 9 3596439 3596519 + Clupeocephala Bilateria Yes 1 1
Tni-Let-7-P2b3b None LET-7 GAGGUAG None None 9 10380397 10380479 + Clupeocephala Bilateria Yes 1 1
Tni-Let-7-P2b4a None LET-7 GAGGUAG None None 9 4666846 4666919 + Clupeocephala Bilateria Yes
Tni-Let-7-P2b4b tni-let-7a-3 LET-7 GAGGUAG MIMAT0002929 None 11 8661684 8661759 - Clupeocephala Bilateria Yes 1 1
Tni-Let-7-P2c2a None LET-7 GAGGUAG None None 19 5408223 5408295 + Clupeocephala Bilateria Yes 1
Tni-Let-7-P2c2b tni-let-7i LET-7 GAGGUAG MIMAT0002978 None 13 9044991 9045067 - Clupeocephala Bilateria Yes 1
Tni-Let-7-P2c3 tni-let-7j LET-7 GAGGUAG MIMAT0003014 None 11 5230982 5231059 + Gnathostomata Bilateria Yes 1
Tni-Mir-1-P1 tni-mir-1 MIR-1 GGAAUGU None MIMAT0003072 15_random 1423496 1423557 - Gnathostomata Bilateria No
Tni-Mir-1-P2a None MIR-1 GGAAUGU None None 14 5699806 5699865 + Clupeocephala Bilateria No 1
Tni-Mir-1-P3 None MIR-1 GGAAUGU None None Un_random 96815883 96815943 + Gnathostomata Bilateria No
Tni-Mir-7-P3 tni-mir-7 MIR-7 GGAAGAC MIMAT0003010 None 8 1820450 1820510 + Gnathostomata Bilateria Unknown 1
Tni-Mir-8-P1a tni-mir-200b MIR-8 AAUACUG None MIMAT0002984 Un_random 2991282 2991341 + Vertebrata Nephrozoa No 1
Tni-Mir-8-P2a tni-mir-200a MIR-8 AACACUG None MIMAT0002982 Un_random 2991451 2991512 + Vertebrata Nephrozoa No 1
Tni-Mir-8-P3a tni-mir-429 MIR-8 AAUACUG None MIMAT0002980 Un_random 2992668 2992726 + Vertebrata Nephrozoa No 1 1
Tni-Mir-9-P1a tni-mir-9-3 MIR-9 CUUUGGU MIMAT0002911 None 13 5474110 5474171 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-9-P1b None MIR-9 CUUUGGU None None 5 5099964 5100025 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-9-P2b tni-mir-9-2 MIR-9 CUUUGGU MIMAT0002911 None 12 2246027 2246086 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-9-P3a None MIR-9 CUUUGGU None None Un_random 34480108 34480169 - Clupeocephala Bilateria Unknown 1 1
Tni-Mir-9-P3b tni-mir-9-1 MIR-9 CUUUGGU MIMAT0002911 None 21_random 1842694 1842755 + Clupeocephala Bilateria Unknown 1
Tni-Mir-9-P4a tni-mir-9-4 MIR-9 CUUUGGU MIMAT0002911 None Un_random 92040539 92040598 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-9-P4b None MIR-9 CUUUGGU None None Un_random 105862125 105862181 - Clupeocephala Bilateria No 1
Tni-Mir-10-P1b1 V tni-mir-10b-2 MIR-10 ACCCUGU MIMAT0002964 None 2 13424290 13424351 - Clupeocephala Eumetazoa 2 Unknown 1 1
Tni-Mir-10-P1b2 tni-mir-10d MIR-10 ACCCUGU MIMAT0003772 None 17 9715801 9715864 + Clupeocephala Eumetazoa Unknown 1
Tni-Mir-10-P1c1 V tni-mir-10c MIR-10 ACCCUGU MIMAT0003088 None Un_random 5507315 5507380 - Clupeocephala Eumetazoa 2 No 1
Tni-Mir-10-P1c2 V None MIR-10 ACCCUGU None None 2 1745676 1745738 - Clupeocephala Eumetazoa 2 No 1
Tni-Mir-10-P1d1 V tni-mir-10b-1 MIR-10 ACCCUGU MIMAT0002964 None 9 4255306 4255366 + Clupeocephala Eumetazoa 2 Unknown 1 1
Tni-Mir-10-P2d1 None MIR-10 ACCCGUA None None 16 8251149 8251210 - Clupeocephala Eumetazoa No 1 1
Tni-Mir-10-P2d2 tni-mir-100 MIR-10 ACCCGUA MIMAT0003064 None 7 5619637 5619693 - Clupeocephala Eumetazoa No 1 1
Tni-Mir-10-P3b2 tni-mir-125a MIR-10 CCCUGAG MIMAT0003082 None 21_random 1797975 1798033 + Clupeocephala Eumetazoa No 1
Tni-Mir-10-P3d1 None MIR-10 CCCUGAG None None 16 8246142 8246203 - Clupeocephala Eumetazoa Unknown 1 1
Tni-Mir-10-P3d2 tni-mir-125b MIR-10 CCCUGAG MIMAT0003062 None 7 5613643 5613704 - Clupeocephala Eumetazoa No 1 1
Tni-Mir-15-P1a2 tni-mir-15a MIR-15 AGCAGCA MIMAT0003106 None 2 11019294 11019352 + Clupeocephala Olfactores No 1
Tni-Mir-15-P1b tni-mir-15b MIR-15 AGCAGCG MIMAT0003086 None 16 2089823 2089885 - Gnathostomata Olfactores No
Tni-Mir-15-P2a2 tni-mir-16 MIR-15 AGCAGCA MIMAT0003108 None 2 11019481 11019546 + Clupeocephala Olfactores No
Tni-Mir-15-P2b None MIR-15 AGCAGCA None None 16 2089596 2089660 - Gnathostomata Olfactores Unknown 1
Tni-Mir-17-P1a1 tni-mir-17-1 MIR-17 AAAGUGC MIMAT0002917 None 5 8188866 8188926 - Clupeocephala Vertebrata No
Tni-Mir-17-P1a2 tni-mir-17-2 MIR-17 AAAGUGC MIMAT0002917 None 2 12891981 12892039 + Clupeocephala Vertebrata No
Tni-Mir-17-P1d None MIR-17 AAAGUGC None None 1 5570107 5570169 - Gnathostomata Vertebrata No 1
Tni-Mir-17-P2a1 tni-mir-18 MIR-17 AAGGUGC MIMAT0002919 None 5 8188734 8188798 - Clupeocephala Vertebrata No
Tni-Mir-17-P2a2 None MIR-17 AAGGUGC None None 2 12892243 12892307 + Clupeocephala Vertebrata No
Tni-Mir-17-P4a1 None MIR-17 AAAGUGC None None 5 8188398 8188455 - Clupeocephala Vertebrata No 1 1
Tni-Mir-17-P4a2 tni-mir-20 MIR-17 AAAGUGC MIMAT0003084 None 2 12892494 12892553 + Clupeocephala Vertebrata No 1
Tni-Mir-17-P4d None MIR-17 AAAGUGC None None 1 5569901 5569959 - Gnathostomata Vertebrata No
Tni-Mir-19-P1a1 tni-mir-19a MIR-19 GUGCAAA None MIMAT0002921 5 8188599 8188656 - Clupeocephala Vertebrata No 1 1
Tni-Mir-19-P1a2 None MIR-19 GUGCAAA None None 2 12892361 12892418 + Clupeocephala Vertebrata No 1
Tni-Mir-19-P2a1 tni-mir-19b MIR-19 GUGCAAA None MIMAT0002923 5 8188261 8188319 - Clupeocephala Vertebrata No
Tni-Mir-19-P2a2 None MIR-19 GUGCAAA None None 2 12892619 12892679 + Clupeocephala Vertebrata No
Tni-Mir-19-P2d None MIR-19 GUGCAAA None None 1 5569689 5569755 - Gnathostomata Vertebrata No 1
Tni-Mir-21-P1 tni-mir-21 MIR-21 AGCUUAU MIMAT0003000 None 7 1044929 1044989 - Clupeocephala Vertebrata Unknown 1
Tni-Mir-21-P2 None MIR-21 AGCUUAU None None Un_random 58489024 58489084 + Clupeocephala Vertebrata No 1 1
Tni-Mir-22-P1a tni-mir-22b MIR-22 AGCUGCC None MIMAT0003046 12 6138920 6138983 + Vertebrata Bilateria No 1 1
Tni-Mir-22-P1b1 tni-mir-22a MIR-22 AGCUGCC None MIMAT0003100 10 10460516 10460578 + Clupeocephala Bilateria No 1 1
Tni-Mir-22-P1b2 None MIR-22 AGCUGCC None None 7 8307611 8307673 - Clupeocephala Bilateria No 1
Tni-Mir-23-P1 tni-mir-23a-2 MIR-23 UCACAUU None MIMAT0002913 15_random 3094562 3094622 - Gnathostomata Vertebrata No
Tni-Mir-23-P2b tni-mir-23b MIR-23 UCACAUU None MIMAT0002954 12 8516226 8516284 + Clupeocephala Vertebrata No 1 1
Tni-Mir-23-P3 tni-mir-23a-3 MIR-23 UCACAUU None MIMAT0002913 3 8969974 8970035 + Gnathostomata Vertebrata No
Tni-Mir-23-P4a tni-mir-23a-1 MIR-23 UCACAUU None MIMAT0002913 1 16058804 16058867 + Clupeocephala Vertebrata No
Tni-Mir-24-P1 None MIR-24 GGCUCAG None None 15_random 3093022 3093080 - Gnathostomata Vertebrata Yes
Tni-Mir-24-P2b tni-mir-24-1 MIR-24 GGCUCAG None MIMAT0003066 12 8518120 8518178 + Clupeocephala Vertebrata Yes
Tni-Mir-24-P3 tni-mir-24-2 MIR-24 GGCUCAG None MIMAT0003066 3 8971072 8971130 + Gnathostomata Vertebrata Yes 1 1
Tni-Mir-24-P4a None MIR-24 GGCUCAG None None 1 16060478 16060537 + Clupeocephala Vertebrata Yes 1 1
Tni-Mir-24-P4b None MIR-24 GGCUCAG None None 15_random 2810523 2810582 + Clupeocephala Vertebrata No 1
Tni-Mir-26-P1a None MIR-26 UCAAGUA None None 6 4014119 4014177 + Clupeocephala Vertebrata No 1
Tni-Mir-26-P1b None MIR-26 UCAAGUA None None 15 2348349 2348409 + Clupeocephala Vertebrata No 1
Tni-Mir-26-P2b None MIR-26 UCAAGUA None None 3 1744449 1744509 - Clupeocephala Vertebrata No 1 1
Tni-Mir-26-P4 tni-mir-26 MIR-26 UCAAGUA MIMAT0003038 None Un_random 52438987 52439046 + Gnathostomata Vertebrata No 1
Tni-Mir-27-P1 None MIR-27 UCACAGU None None 15_random 3094204 3094266 - Gnathostomata Vertebrata No 1
Tni-Mir-27-P2b tni-mir-27b MIR-27 UCACAGU None MIMAT0002952 12 8516519 8516581 + Clupeocephala Vertebrata No 1
Tni-Mir-27-P3 tni-mir-27c MIR-27 UCACAGU None MIMAT0003078 3 8970188 8970245 + Gnathostomata Vertebrata No 1 1
Tni-Mir-27-P4a tni-mir-27e MIR-27 UCACAGU None MIMAT0003068 1 16059190 16059253 + Clupeocephala Vertebrata No
Tni-Mir-27-P4b None MIR-27 UCACAGU None None 15_random 2810064 2810128 + Clupeocephala Vertebrata No
Tni-Mir-29-P1b1 tni-mir-29b-1 MIR-29 AGCACCA None MIMAT0003056 Un_random 8673333 8673394 + Clupeocephala Bilateria No 1 1
Tni-Mir-29-P1b2 None MIR-29 UGAUUUC None None 13 10251338 10251399 + Clupeocephala Bilateria No 1 1
Tni-Mir-29-P1d1 None MIR-29 AGCACCA None None 11 8724044 8724104 + Clupeocephala Bilateria No
Tni-Mir-29-P1d2 tni-mir-29b-2 MIR-29 AGCACCA None MIMAT0003056 9 9583207 9583267 + Clupeocephala Bilateria No 1
Tni-Mir-29-P2b1 tni-mir-29a-2 MIR-29 AGCACCA None MIMAT0003054 Un_random 8673485 8673545 + Clupeocephala Bilateria No
Tni-Mir-29-P2d1 None MIR-29 AGCACCA None None 11 8724289 8724347 + Clupeocephala Bilateria No 1
Tni-Mir-29-P2d2 tni-mir-29a-1 MIR-29 AGCACCA None MIMAT0003054 9 9583409 9583468 + Clupeocephala Bilateria No 1
Tni-Mir-30-P1a tni-mir-30d MIR-30 GUAAACA MIMAT0002950 None 21 5298839 5298898 + Gnathostomata Vertebrata No 1 1
Tni-Mir-30-P1b None MIR-30 UUUCAGU None None 17 8583486 8583548 + Gnathostomata Vertebrata No 1
Tni-Mir-30-P1d None MIR-30 UUUCAGU None None 21 1387761 1387825 + Gnathostomata Vertebrata No 1
Tni-Mir-30-P2a tni-mir-30b MIR-30 GUAAACA MIMAT0002948 None 21 5299014 5299077 + Gnathostomata Vertebrata Yes 1
Tni-Mir-30-P2b tni-mir-30c MIR-30 GUAAACA MIMAT0003023 None 17 8584380 8584441 + Gnathostomata Vertebrata No 1 1
Tni-Mir-30-P2d None MIR-30 GUAAACA None None 21 1387972 1388031 + Gnathostomata Vertebrata No 1 1
Tni-Mir-31 None MIR-31 GGCAAGA None None Un_random 12278863 12278922 - Bilateria Bilateria Unknown 1
Tni-Mir-33-P1a None MIR-33 UGCAUUG None None 3 9418172 9418232 - Clupeocephala Bilateria Yes 1 1
Tni-Mir-33-P1b None MIR-33 UGCAUUG None None 2 6025426 6025486 + Clupeocephala Bilateria Unknown 1 1
Tni-Mir-33-P3 None MIR-33 UGCAUUG None None Un_random 5787244 5787303 + Gnathostomata Bilateria Yes 1
Tni-Mir-34-P1 None MIR-34 GGCAGUG None None 9 2828345 2828409 - Gnathostomata Bilateria Unknown 1 1
Tni-Mir-34-P3c None MIR-34 GGCAGUG None None 12 5648628 5648686 + Gnathostomata Bilateria Unknown 1
Tni-Mir-92-P1a1 tni-mir-92-2 MIR-92 AUUGCAC None MIMAT0002925 5 8188110 8188167 - Clupeocephala Bilateria No 1
Tni-Mir-92-P1a2 tni-mir-92-1 MIR-92 AUUGCAC None MIMAT0002925 2 12892725 12892783 + Clupeocephala Bilateria No 1
Tni-Mir-92-P2d tni-mir-25 MIR-92 AUUGCAC None MIMAT0002915 1 5569539 5569598 - Gnathostomata Bilateria No 1 1
Tni-Mir-96-P1a tni-mir-96 MIR-96 UUGGCAC MIMAT0003092 None 19 3385392 3385455 - Clupeocephala Bilateria Unknown 1
Tni-Mir-96-P1b None MIR-96 UUGGCAC None None 13 5039982 5040043 - Clupeocephala Bilateria Unknown 1
Tni-Mir-96-P2a tni-mir-182 MIR-96 UUGGCAA None MIMAT0003094 19 3385158 3385222 - Clupeocephala Bilateria No
Tni-Mir-96-P2b None MIR-96 UUGGCAA None None 13 5039756 5039820 - Clupeocephala Bilateria Unknown 1
Tni-Mir-96-P3a tni-mir-183 MIR-96 AUGGCAC MIMAT0003090 None 19 3385640 3385701 - Clupeocephala Bilateria Unknown 1 1
Tni-Mir-96-P3b None MIR-96 AUGGCAC None None 13 5040154 5040215 - Clupeocephala Bilateria Unknown 1
Tni-Mir-101-P1 V tni-mir-101a MIR-101 ACAGUAC None MIMAT0002903 1 20355621 20355679 + Vertebrata Vertebrata 2 No
Tni-Mir-101-P2 V tni-mir-101b MIR-101 ACAGUAC None MIMAT0003040 4 1028860 1028918 + Vertebrata Vertebrata 2 No 1 1
Tni-Mir-103-P1a tni-mir-107 MIR-103 GCAGCAU None MIMAT0003044 17 10614424 10614483 + Clupeocephala Bilateria No 1
Tni-Mir-103-P2a None MIR-103 GCAGCAU None None 10 12326434 12326493 - Clupeocephala Bilateria No
Tni-Mir-103-P2b tni-mir-103 MIR-103 GCAGCAU None MIMAT0003042 1 5372738 5372798 - Clupeocephala Bilateria No 1 1
Tni-Mir-122 tni-mir-122 MIR-122 GGAGUGU MIMAT0002992 None 4 6516674 6516731 + Vertebrata Vertebrata No 1
Tni-Mir-124-P1b V tni-mir-124-1 MIR-124 AAGGCAC None MIMAT0002897 6 3469441 3469499 - Clupeocephala Bilateria 2 No 1
Tni-Mir-124-P2a V tni-mir-124-2 MIR-124 AAGGCAC None MIMAT0002897 14 9544670 9544730 - Clupeocephala Bilateria 2 No 1
Tni-Mir-124-P2b V tni-mir-124-2 MIR-124 AAGGCAC None MIMAT0002897 14 9544670 9544730 - Clupeocephala Bilateria 2 No 1
Tni-Mir-124-P4 V tni-mir-124-3 MIR-124 AAGGCAC None MIMAT0002897 10 7519420 7519479 + Gnathostomata Bilateria 2 No 1
Tni-Mir-126-P2b V tni-mir-126 MIR-126 CGUACCG None MIMAT0002958 4 5708444 5708502 - Clupeocephala Olfactores 3 No 1
Tni-Mir-128-P1 tni-mir-128-2 MIR-128 CACAGUG None MIMAT0003019 21 1237210 1237268 - Gnathostomata Vertebrata No 1 1
Tni-Mir-128-P2a tni-mir-128-1 MIR-128 CACAGUG None MIMAT0003019 3 4160313 4160370 - Clupeocephala Vertebrata No 1
Tni-Mir-129-P1a tni-mir-129-1 MIR-129 AGCCCUU MIMAT0003036 None 13 12882721 12882781 + Clupeocephala Chordata No 1 1 1
Tni-Mir-129-P1b None MIR-129 AGCCCUU None None 5 11469568 11469630 + Clupeocephala Chordata No 1 1 1
Tni-Mir-129-P2a None MIR-129 AGCCCUU None None 13 4272364 4272424 + Clupeocephala Chordata No 1 1 1
Tni-Mir-129-P2b tni-mir-129-2 MIR-129 UUUUUGC MIMAT0003036 None 19 2390426 2390490 - Clupeocephala Chordata Unknown 1 1 1
Tni-Mir-130-P1a2 tni-mir-130 MIR-130 AGUGCAA None MIMAT0002990 4 1515785 1515843 + Clupeocephala Vertebrata No 1
Tni-Mir-130-P2a2 tni-mir-301 MIR-130 AGUGCAA None MIMAT0002988 4 1516061 1516123 + Clupeocephala Vertebrata No 1
Tni-Mir-132-P1a tni-mir-132 MIR-132 AACAGUC None MIMAT0003060 Un_random 63608572 63608634 + Clupeocephala Vertebrata No 1
Tni-Mir-132-P1b None MIR-132 AACAGUC None None 7 7924414 7924476 - Clupeocephala Vertebrata No
Tni-Mir-132-P2a tni-mir-212 MIR-132 CCUUGGC None MIMAT0003048 Un_random 63608305 63608373 + Clupeocephala Vertebrata No 1
Tni-Mir-132-P2b None MIR-132 CCUUGGC None None 7 7924699 7924767 - Clupeocephala Vertebrata No 1
Tni-Mir-133-P1 V tni-mir-133 MIR-133 UUGGUCC None MIMAT0003058 15_random 1420865 1420924 - Gnathostomata Bilateria 2 No 1
Tni-Mir-133-P2a V None MIR-133 UUGGUCC None None 14 5700455 5700514 + Clupeocephala Bilateria 2 Unknown 1
Tni-Mir-135-P1 tni-mir-135b MIR-135 AUGGCUU MIMAT0003031 None 9 635490 635549 + Gnathostomata Chordata No 1
Tni-Mir-135-P2a None MIR-135 AUGGCUU None None 13 5265577 5265638 + Clupeocephala Chordata Unknown 1
Tni-Mir-135-P2b None MIR-135 AUGGCUU None None 19 3913178 3913236 - Clupeocephala Chordata No 1
Tni-Mir-135-P4a tni-mir-135a MIR-135 AUGGCUU MIMAT0003052 None 11 11400949 11401009 - Clupeocephala Chordata Unknown 1
Tni-Mir-135-P4b None MIR-135 AUGGCUU None None 9 8239055 8239116 - Clupeocephala Chordata Unknown 1
Tni-Mir-137-P3b tni-mir-137 MIR-137 UAUUGCU None MIMAT0002933 18 4783334 4783392 - Clupeocephala Bilateria Unknown 1
Tni-Mir-138-P1a None MIR-138 GCUGGUG None None 21 4348474 4348534 - Clupeocephala Vertebrata Unknown 1
Tni-Mir-138-P2 tni-mir-138 MIR-138 GCUGGUG MIMAT0003080 None 13 1437205 1437272 + Vertebrata Vertebrata Unknown 1
Tni-Mir-139 None MIR-139 CUACAGU None None Un_random 82311596 82311657 - Gnathostomata Gnathostomata No
Tni-Mir-140-P2 V tni-mir-140 MIR-140 CCACAGG MIMAT0003025 None 13 1172500 1172561 + Gnathostomata Vertebrata 2 No 1 1
Tni-Mir-142-P2 V tni-mir-142a MIR-142 AUAAAGU MIMAT0002909 None 7 2557223 2557282 + Gnathostomata Vertebrata 4 No 1
Tni-Mir-142-P4 V tni-mir-142b MIR-142 AUAAAGU MIMAT0002946 None 16 3999100 3999159 + Gnathostomata Vertebrata 4 No 1
Tni-Mir-144 tni-mir-144 MIR-144 ACAGUAU None MIMAT0003021 7 2925543 2925603 - Vertebrata Vertebrata No 1
Tni-Mir-146-P1 None MIR-146 GAGAACU None None 17 4971502 4971563 + Gnathostomata Vertebrata No 1
Tni-Mir-147 None MIR-147 UGUGCGG None None 5 10212485 10212547 + Vertebrata Vertebrata No
Tni-Mir-148-P2 tni-mir-148 MIR-148 CAGUGCA None MIMAT0002962 2 13327074 13327133 - Gnathostomata Vertebrata No
Tni-Mir-148-P3 tni-mir-152 MIR-148 CAGUGCA None MIMAT0003104 Un_random 5385294 5385354 - Gnathostomata Vertebrata No 1 1
Tni-Mir-150 None MIR-150 CUCCCAA None None Un_random 55607759 55607819 + Gnathostomata Gnathostomata No
Tni-Mir-153-P1b tni-mir-153a MIR-153 UGCAUAG None MIMAT0003012 15 948753 948813 + Clupeocephala Bilateria No 1
Tni-Mir-153-P2a tni-mir-153b MIR-153 UGCAUAG None MIMAT0003002 2 15371791 15371849 + Clupeocephala Bilateria No
Tni-Mir-153-P2b None MIR-153 UGCAUAG None None 3 991154 991212 + Clupeocephala Bilateria No 1
Tni-Mir-155 None MIR-155 UAAUGCU None None 5 8201365 8201424 - Vertebrata Vertebrata No 1
Tni-Mir-181-P1a1 tni-mir-181a-1 MIR-181 ACAUUCA MIMAT0003050 MIMAT0003006 1 18565261 18565323 - Clupeocephala Vertebrata No
Tni-Mir-181-P1b1 None MIR-181 ACAUUCA None None Un_random 59809509 59809568 - Clupeocephala Vertebrata Unknown
Tni-Mir-181-P1c1 None MIR-181 ACAUUCA None None 15 5125424 5125490 + Clupeocephala Vertebrata No 1
Tni-Mir-181-P1c2 tni-mir-181a-2 MIR-181 ACAUUCA MIMAT0003050 None Un_random 58989026 58989088 - Clupeocephala Vertebrata No 1
Tni-Mir-181-P2a1 tni-mir-181b-1 MIR-181 ACAUUCA MIMAT0003004 None 1 18565056 18565116 - Clupeocephala Vertebrata Yes 1
Tni-Mir-181-P2b1 tni-mir-181b-2 MIR-181 ACAUUCA MIMAT0003004 None Un_random 59809215 59809273 - Clupeocephala Vertebrata Unknown
Tni-Mir-181-P2c1 V None MIR-181 ACAUUCA None None 15 5125603 5125664 + Clupeocephala Vertebrata 2 Unknown 1
Tni-Mir-181-P2c2 None MIR-181 ACAUUCA None None Un_random 58987909 58987968 - Clupeocephala Vertebrata Unknown 1
Tni-Mir-184-P1 None MIR-184 GGACGGA None None 13 2752851 2752914 + Clupeocephala Nephrozoa No 1
Tni-Mir-184-P2 tni-mir-184 MIR-184 GGACGGA None MIMAT0002927 5 2363268 2363330 - Clupeocephala Nephrozoa No 1
Tni-Mir-187 tni-mir-187 MIR-187 CGUGUCU None MIMAT0002931 21 1019291 1019352 - Osteichthyes Osteichthyes Yes 1
Tni-Mir-190-P1a None MIR-190 GAUAUGU None None 5 2569527 2569586 - Clupeocephala Bilateria No 1 1
Tni-Mir-190-P1b tni-mir-190 MIR-190 GAUAUGU MIMAT0003110 None 13 7312010 7312068 - Clupeocephala Bilateria No 1 1
Tni-Mir-190-P3 None MIR-190 GAUAUGU None None 8 7791021 7791086 - Gnathostomata Bilateria Unknown 1
Tni-Mir-191 None MIR-191 AACGGAA None None 9 665421 665482 + Gnathostomata Gnathostomata No 1
Tni-Mir-192-P4b V tni-mir-192 MIR-192 UGACCUA MIMAT0002942 None 7 7655511 7655571 + Clupeocephala Vertebrata 2 No 1
Tni-Mir-193-P1b2 tni-mir-193 MIR-193 ACUGGCC None MIMAT0002970 Un_random 38919584 38919642 + Clupeocephala Bilateria No 1 1
Tni-Mir-193-P2b2 tni-mir-365 MIR-193 AAUGCCC None MIMAT0002968 Un_random 38921291 38921353 + Clupeocephala Bilateria No 1
Tni-Mir-194-P4a None MIR-194 GUAACAG None None 1 8091282 8091346 - Clupeocephala Vertebrata No 1 1
Tni-Mir-194-P4b tni-mir-194 MIR-194 GUAACAG MIMAT0002944 None 7 7655331 7655389 + Clupeocephala Vertebrata No 1 1
Tni-Mir-196-P1a tni-mir-196a-2 MIR-196 AGGUAGU MIMAT0002956 None 21 3025758 3025815 + Clupeocephala Olfactores Unknown 1
Tni-Mir-196-P1b None MIR-196 AGGUAGU None None 8 6797449 6797506 + Clupeocephala Olfactores No 1
Tni-Mir-196-P3a tni-mir-196b MIR-196 AGGUAGU MIMAT0003034 None Un_random 5576389 5576449 - Clupeocephala Olfactores No 1
Tni-Mir-196-P4a1 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None 3 685144 685202 - T. nigroviridis Olfactores Unknown 1
Tni-Mir-196-P4a2 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None 3 700487 700545 - T. nigroviridis Olfactores Unknown 1
Tni-Mir-196-P4a3 tni-mir-196a-1 MIR-196 AGGUAGU MIMAT0002956 None 9 4223649 4223707 + T. nigroviridis Olfactores Unknown 1
Tni-Mir-199-P1b V tni-mir-199-1 MIR-199 CAGUAGU MIMAT0002960 None 15 2934183 2934243 + Clupeocephala Vertebrata 3 No 1
Tni-Mir-199-P2a V tni-mir-199-2 MIR-199 CAGUAGU MIMAT0002960 None 4 2900527 2900587 - Clupeocephala Vertebrata 3 No
Tni-Mir-199-P3 V tni-mir-199-3 MIR-199 CAGUAGU MIMAT0002960 None 3 11403070 11403130 - Gnathostomata Vertebrata 3 No 1
Tni-Mir-202 tni-mir-202 MIR-202 UCCUAUG None MIMAT0003074 Un_random 94550743 94550800 + Vertebrata Vertebrata Unknown
Tni-Mir-203-P2 V tni-mir-203 MIR-203 UGAAAUG None MIMAT0003076 Un_random 105176090 105176149 + Clupeocephala Vertebrata 2 No
Tni-Mir-204-P1a tni-mir-204a MIR-204 UCCCUUU MIMAT0003102 None 13 7729309 7729365 + Clupeocephala Vertebrata No 1 1
Tni-Mir-204-P2 tni-mir-204b MIR-204 UCCCUUU MIMAT0002935 None 12 981062 981119 + Gnathostomata Vertebrata Unknown 1 1
Tni-Mir-205-P4a tni-mir-205 MIR-205 CCUUCAU MIMAT0002966 None 9 9353934 9353993 - Clupeocephala Vertebrata No 1
Tni-Mir-210 tni-mir-210 MIR-210 GCCACUG None MIMAT0003096 13 6095031 6095092 + Bilateria Bilateria No 1
Tni-Mir-214-P1 V tni-mir-214 MIR-214 GCCUGUC None MIMAT0003027 1 12449356 12449416 + Clupeocephala Gnathostomata 2 No 1
Tni-Mir-214-P2 V tni-mir-214 MIR-214 CAGCAGG None MIMAT0003027 15 2935595 2935657 + Clupeocephala Gnathostomata 2 No
Tni-Mir-216-P2a tni-mir-216b MIR-216 AAUCUCU MIMAT0002976 None 17 5747094 5747154 + Vertebrata Nephrozoa Unknown 1
Tni-Mir-216-P2b tni-mir-216a MIR-216 AAUCUCA MIMAT0002974 None 17 5747764 5747826 + Vertebrata Nephrozoa Unknown 1
Tni-Mir-217 tni-mir-217 MIR-217 ACUGCAU MIMAT0002972 None 17 5748319 5748377 + Chordata Chordata Unknown 1
Tni-Mir-218-P2 tni-mir-218a-2 MIR-218 UGUGCUU MIMAT0002994 None 18 234311 234377 + Gnathostomata Vertebrata Unknown
Tni-Mir-218-P3 tni-mir-218b MIR-218 UGUGCUU MIMAT0002986 None 4 1554674 1554731 + Gnathostomata Vertebrata Unknown 1 1
Tni-Mir-218-P4 tni-mir-218a-1 MIR-218 UGUGCUU MIMAT0002994 None 1 5655180 5655244 - Gnathostomata Vertebrata Unknown 1
Tni-Mir-219-P2a None MIR-219 GAUUGUC None None 4 1194347 1194413 + Clupeocephala Bilateria Unknown 1
Tni-Mir-219-P2b tni-mir-219-1 MIR-219 GAUUGUC MIMAT0002901 None 12 10155057 10155122 - Clupeocephala Bilateria Unknown 1 1
Tni-Mir-219-P3a tni-mir-219-2 MIR-219 GAUUGUC MIMAT0002901 None Un_random 16276637 16276702 + Clupeocephala Bilateria Unknown 1
Tni-Mir-219-P3b None MIR-219 GAUUGUC None None 8 6475886 6475950 - Clupeocephala Bilateria Unknown 1 1
Tni-Mir-221-P1a1 tni-mir-222 MIR-221 GCUACAU None MIMAT0002905 CAAE01017358.1_SCAF17358 560 621 - Clupeocephala Vertebrata No 1 1 1
Tni-Mir-221-P2a1 tni-mir-221 MIR-221 GCUACAU None MIMAT0002907 CAAE01017358.1_SCAF17358 254 317 - Clupeocephala Vertebrata No 1 1
Tni-Mir-223 tni-mir-223 MIR-223 GUCAGUU None MIMAT0002895 Un_random 92603290 92603354 - Vertebrata Vertebrata No 1
Tni-Mir-338-P1 None MIR-338 CCAGCAU None None 2 6249043 6249104 - Vertebrata Vertebrata No 1
Tni-Mir-338-P2a tni-mir-338 MIR-338 CCAGCAU None MIMAT0003008 3 10941080 10941140 + Clupeocephala Vertebrata No 1
Tni-Mir-338-P2b None MIR-338 CCAGCAU None None 2 2385304 2385364 + Clupeocephala Vertebrata No 1 1
Tni-Mir-375-P2 tni-mir-375 MIR-375 UUGUUCG None MIMAT0003070 2 17702703 17702760 - Clupeocephala Nephrozoa No 1
Tni-Mir-425 None MIR-425 AUGACAC None None 9 665884 665947 + Gnathostomata Gnathostomata No 1
Tni-Mir-451 None MIR-451 AACCGUU None 7 2925418 2925460 - Vertebrata Vertebrata NA 1
Tni-Mir-455-P1 V tni-mir-455 MIR-455 AUGUGCC MIMAT0003029 None None None None None Clupeocephala Vertebrata 3 No
Tni-Mir-455-P2 V None MIR-455 AUGUGCC None None Un_random 101732509 101732566 + Clupeocephala Vertebrata 3 No
Tni-Mir-458 tni-mir-458 MIR-458 UAGCUCU None MIMAT0002937 1_random 761745 761801 - Osteichthyes Osteichthyes No 1
Tni-Mir-459 None MIR-459 CAGUAAC None None 3 2976224 2976286 - Vertebrata Vertebrata Unknown
Tni-Mir-460-P1 tni-mir-460 MIR-460 ACAGCGC None MIMAT0002998 15_random 1243748 1243806 - Osteichthyes Osteichthyes Yes 1
Tni-Mir-460-P2a None MIR-460 CCUCAUU None None Un_random 54367914 54367972 + T. nigroviridis Osteichthyes Unknown 1
Tni-Mir-460-P2b None MIR-460 CCUCAUU None None Un_random 36284986 36285045 + T. nigroviridis Osteichthyes Unknown 1
Tni-Mir-489 V tni-mir-489 MIR-489 UGACAUC None MIMAT0002939 21_random 1370454 1370512 + Osteichthyes Osteichthyes 2 No 1
Tni-Mir-499-P1 None MIR-499 UAAGACU None None 11 10019981 10020040 - Clupeocephala Vertebrata Unknown 1 1
Tni-Mir-722-P1 V None MIR-722 UUUGCAG None None 3 11284670 11284734 - Clupeocephala Osteichthyes 2 No 1 1
Tni-Mir-722-P2 V None MIR-722 UUUGCAG None None Un_random 14853546 14853610 + Clupeocephala Osteichthyes 2 No 1 1
Tni-Mir-723-P1 None MIR-723 GACAUCA None None 3 14958877 14958937 - Clupeocephala Clupeocephala No
Tni-Mir-723-P2 None MIR-723 GACAUCA None None 2 3615741 3615798 + Clupeocephala Clupeocephala Unknown
Tni-Mir-724-P1 V None MIR-724 UAAAGGG None None 9 3122558 3122618 - Clupeocephala Neopterygii 2 Unknown
Tni-Mir-724-P2 V None MIR-724 UAAAGGG None None 11 9264426 9264486 + Clupeocephala Neopterygii 2 Unknown
Tni-Mir-725 None MIR-725 UCAGUCA None None 1 16440623 16440684 + Gnathostomata Gnathostomata Unknown
Tni-Mir-726 None MIR-726 UCACUAC None None 11 10121083 10121143 - Osteichthyes Osteichthyes Unknown 1
Tni-Mir-727-P1 V None MIR-727 UGAGGCG None None 6 6650136 6650202 + Clupeocephala Osteichthyes 2 No
Tni-Mir-727-P2 V None MIR-727 UGAGGCG None None 15 2764145 2764210 - Clupeocephala Osteichthyes 2 No
Tni-Mir-728-P1 None MIR-728 AUACUAA None None 6 6651213 6651275 + Clupeocephala Neopterygii No 1 1
Tni-Mir-728-P2 None MIR-728 AUACUAA None None 15 2762818 2762877 - Clupeocephala Neopterygii Unknown 1
Tni-Mir-737 None MIR-737 UUUUUUU None None Un_random 92321647 92321707 - Osteichthyes Osteichthyes Unknown 1 1
Tni-Mir-1306 None MIR-1306 CACCUCC None None 12 10862462 10862522 - Gnathostomata Gnathostomata Yes 1
Tni-Mir-1388 None MIR-1388 UCUCAGG None None 9 5786618 5786676 + Gnathostomata Gnathostomata No 1
Tni-Mir-1788 None MIR-1788 GCUUGUU None None 2 17694044 17694101 - Vertebrata Vertebrata Yes 1
Tni-Mir-2184-P1 None MIR-2184 ACAGUAA None None 7 7923438 7923495 + Clupeocephala Gnathostomata No
Tni-Mir-2188 None MIR-2188 AGGUCCA None None 12 6747621 6747680 - Gnathostomata Gnathostomata No 1 1
Tni-Mir-7132-P1 None MIR-7132 ACUUGGU None None Un_random 7127190 7127247 + Clupeocephala Clupeocephala No 1 1 1
Tni-Mir-7133 None MIR-7133 AGUUUGA None None Un_random 54516665 54516723 + Clupeocephala Clupeocephala No 1
Tni-Mir-7147 None MIR-7147 GUACCAU None None 6 5697463 5697520 - Osteichthyes Osteichthyes Unknown 1
Tni-Mir-8160-P2 None MIR-8160 GAAUAAU None None Un_random 13327022 13327081 - Acanthomorpha Acanthomorpha Unknown
Tni-Novel-1 None TNI-NOVEL-1 CUCGCAG None None 1 14203636 14203691 - T. nigroviridis T. nigroviridis No 1
Tni-Novel-2 None TNI-NOVEL-2 CGGAACC None None 16 8126668 8126722 - T. nigroviridis T. nigroviridis No 1
Tni-Novel-3 None TNI-NOVEL-3 AGCUGUU None None 3 13094716 13094775 + T. nigroviridis T. nigroviridis No

(red - mature/co-mature, blue - star)

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