MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-15-P1b

Family name MIR-15 (all species)
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-15b
Paralogues Tni-Mir-15-P1a2  Tni-Mir-15-P2a2  Tni-Mir-15-P2b 
Orthologues Aca-Mir-15-P1b  Ami-Mir-15-P1b  Bta-Mir-15-P1b  Cfa-Mir-15-P1b  Cin-Mir-15-P1  Cja-Mir-15-P1b  Cli-Mir-15-P1b  Cmi-Mir-15-P1b  Cpi-Mir-15-P1b  Cpo-Mir-15-P1b  Dno-Mir-15-P1b  Dre-Mir-15-P1b  Eca-Mir-15-P1b  Ete-Mir-15-P1b  Gga-Mir-15-P1b  Gja-Mir-15-P1b  Gmo-Mir-15-P1b  Hsa-Mir-15-P1b  Laf-Mir-15-P1b  Lch-Mir-15-P1b  Loc-Mir-15-P1b  Mal-Mir-15-P1b  Mml-Mir-15-P1b  Mmr-Mir-15-P1b  Mmu-Mir-15-P1b  Mun-Mir-15-P1b  Oan-Mir-15-P1b  Ocu-Mir-15-P1b  Pab-Mir-15-P1b  Pbv-Mir-15-P1b  Rno-Mir-15-P1b  Sha-Mir-15-P1b  Spt-Mir-15-P1b  Sto-Mir-15-P1b  Tgu-Mir-15-P1b  Xla-Mir-15-P1b1  Xla-Mir-15-P1b2  Xtr-Mir-15-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 16: 2089823-2089885 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1b)		 Mir-15-P2b 16: 2089596-2089660 [-] UCSC Ensembl
Mir-15-P1b 16: 2089823-2089885 [-] UCSC Ensembl
Seed AGCAGCG
Precursor
(pre-Mir +30nt flank)		 
GCUGGGUAGAGGAUGGCCCUUAGACUGCUUUAGCAGCGCAUCAUGGUUUGUAAUGAUGUGGAAAAAAGGUGCAAACCAUAAUUUGCUGCUUUAGAAUUUUAAGGAAAAAGGCGUUCCACCUGA
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Structure
        10          20        30        40        50        60 
GCUGGGUAGAGGAUGGC--|      CUG  UU       C  C          AUGAUGUG 
                   CCUUAGA   CU  AGCAGCG AU AUGGUUUGUA        \
                   GGAAUUU   GA  UCGUCGU UA UACCAAACGU        G
AGUCCACCUUGCGGAAAAA^      UAA  UU       U  A          GGAAAAAA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Sp Sp Sp To
Mature sequence

Tni-Mir-15-P1b_5p
mirBase accessionMIMAT0003086
Sequence 
0- UAGCAGCGCAUCAUGGUUUGUA -22
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Star sequence

Tni-Mir-15-P1b_3p*
mirBase accessionNone
Sequence 
41- CAAACCAUAAUUUGCUGCUUUA -63
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