MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-15-P1b

Family name MIR-15 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-15-P1a  Cmi-Mir-15-P1c  Cmi-Mir-15-P2a  Cmi-Mir-15-P2b  Cmi-Mir-15-P2c 
Orthologues Aca-Mir-15-P1b  Ami-Mir-15-P1b  Bta-Mir-15-P1b  Cfa-Mir-15-P1b  Cin-Mir-15-P1  Cja-Mir-15-P1b  Cli-Mir-15-P1b  Cpi-Mir-15-P1b  Cpo-Mir-15-P1b  Dno-Mir-15-P1b  Dre-Mir-15-P1b  Eca-Mir-15-P1b  Ete-Mir-15-P1b  Gga-Mir-15-P1b  Gja-Mir-15-P1b  Gmo-Mir-15-P1b  Hsa-Mir-15-P1b  Laf-Mir-15-P1b  Lch-Mir-15-P1b  Loc-Mir-15-P1b  Mal-Mir-15-P1b  Mml-Mir-15-P1b  Mmr-Mir-15-P1b  Mmu-Mir-15-P1b  Mun-Mir-15-P1b  Oan-Mir-15-P1b  Ocu-Mir-15-P1b  Pab-Mir-15-P1b  Pbv-Mir-15-P1b  Rno-Mir-15-P1b  Sha-Mir-15-P1b  Spt-Mir-15-P1b  Sto-Mir-15-P1b  Tgu-Mir-15-P1b  Tni-Mir-15-P1b  Xla-Mir-15-P1b1  Xla-Mir-15-P1b2  Xtr-Mir-15-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635855.1: 15680972-15681031 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1b)		 Mir-15-P1b KI635855.1: 15680972-15681031 [+] UCSC Ensembl
Mir-15-P2b KI635855.1: 15681135-15681203 [+] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
ACAAAGUACUGGACAUGUUUUAAAUUGCUGUAGCAGCACAUCAUGGUUUGCAGGACUGCCUGAUAUGGCAAAUCAUAAUUUGCUGCUUUAGUGCUUUAAGGCUUAAUCAGAAGACAAGCU
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Structure
        10          20        30        40        50         
ACAAAGUACUGGACAUG--|      UU    U       C  C         AGGACUG 
                   UUUUAAA  GCUG AGCAGCA AU AUGGUUUGC       C
                   GGAAUUU  UGAU UCGUCGU UA UACUAAACG       C
UCGAACAGAAGACUAAUUC^      CG    U       U  A         GUAUAGU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-15-P1b_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACAUCAUGGUUUGCA -22
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Star sequence

Cmi-Mir-15-P1b_3p*
mirBase accessionNone
Sequence 
38- CAAAUCAUAAUUUGCUGCUUUA -60
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