MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-15-P2b

Family name MIR-15 (all species)
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-15-P1a  Cmi-Mir-15-P1b  Cmi-Mir-15-P1c  Cmi-Mir-15-P2a  Cmi-Mir-15-P2c 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cja-Mir-15-P2b  Cli-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Eca-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Laf-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmr-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Neu-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pab-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635855.1: 15681135-15681203 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2b)		 Mir-15-P1b KI635855.1: 15680972-15681031 [+] UCSC Ensembl
Mir-15-P2b KI635855.1: 15681135-15681203 [+] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
UUUUACUUAAUGAAAAUGCCAGUUACAUUCUAGCAGCACGUAAAUAUUGGCGUGGUGAAAAUAAGACCAAAAAACGCCAAUAUUACUUGUGCUGCUGCAGUGUGGCGUGGUUUGUCGACUCCCAGUCCA
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Structure
        10         20         30        40         50        60   
UUUUACUUAAUGAAAAU-    -        C          UA-|          GGUGAAAAU 
                  GCCA GUUACAUU UAGCAGCACG   AAUAUUGGCGU         A
                  UGGU CGGUGUGA GUCGUCGUGU   UUAUAACCGCA         A
ACCUGACCCUCAGCUGUU    G        C          UCA^          AAAAACCAG 
       120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-15-P2b_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACGUAAAUAUUGGCGU -23
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Star sequence

Cmi-Mir-15-P2b_3p*
mirBase accessionNone
Sequence 
45- GCCAAUAUUACUUGUGCUGCUGCA -69
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