MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-15-P2b

Family name MIR-15 (all species)
Seed AGCAGCA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-16-2
Paralogues Hsa-Mir-15-P1a  Hsa-Mir-15-P1b  Hsa-Mir-15-P1c  Hsa-Mir-15-P1d  Hsa-Mir-15-P2a  Hsa-Mir-15-P2c  Hsa-Mir-15-P2d 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mdo-Mir-15-P2b  Mml-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(hg38)
chr3: 160404754-160404818 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P2b)
Mir-15-P1b chr3: 160404607-160404666 [+] UCSC Ensembl
Mir-15-P2b chr3: 160404754-160404818 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGGAUGAACUGACAUACUUGUUCCACUCUAGCAGCACGUAAAUAUUGGCGUAGUGAAAUAUAUAUUAAACACCAAUAUUACUGUGCUGCUUUAGUGUGACAGGGAUACAGCAACUAUUUUAUC
Get precursor sequence
Structure
        10          20        30         40        50        60  
UUUGGAUGAACUGACAUA--     UC    CU        -|   A      C  AGUGAAAU 
                    CUUGU  CACU  AGCAGCAC GUAA UAUUGG GU        \
                    GGACA  GUGA  UCGUCGUG CAUU AUAACC CA        A
CUAUUUUAUCAACGACAUAG     GU    UU        U^   -      A  AAUUAUAU 
   120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ar Bl Bo Bo Bo Bo Bo Br Br Br Br Br Br Br Br Br Br Br Es Ga He He He He He Ki Li Lu Ly Mu Ne Pa Pl Pl Sk Sp Sp St Su Te Th To Tr Ve
Mature sequence

Hsa-Mir-15-P2b_5p

mirBase accessionMIMAT0000069
Sequence
0- UAGCAGCACGUAAAUAUUGGCGU -23
Get sequence
Proposed targets microrna.org: MIMAT0000069
TargetScanVert: hsa-miR-16-5p
TargetMiner: hsa-miR-16-5p
miRDB: MIMAT0000069
Star sequence

Hsa-Mir-15-P2b_3p*

mirBase accessionMIMAT0004518
Sequence
42- ACCAAUAUUACUGUGCUGCUUUA -65
Get sequence
Proposed targets microrna.org: MIMAT0004518
TargetScanVert: hsa-miR-16-2-3p
TargetMiner: hsa-miR-16-2-3p
miRDB: MIMAT0004518