MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-15-P2b

Family name MIR-15 (all species)
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-16-2
Paralogues Mdo-Mir-15-P1a  Mdo-Mir-15-P1c-v1  Mdo-Mir-15-P1d  Mdo-Mir-15-P2a  Mdo-Mir-15-P2c-v1  Mdo-Mir-15-P2d 
Orthologues Aca-Mir-15-P2b  Ami-Mir-15-P2b  Bta-Mir-15-P2b  Cfa-Mir-15-P2b  Cin-Mir-15-P2  Cja-Mir-15-P2b  Cli-Mir-15-P2b  Cmi-Mir-15-P2b  Cpi-Mir-15-P2b  Cpo-Mir-15-P2b  Dno-Mir-15-P2b  Dre-Mir-15-P2b  Eca-Mir-15-P2b  Ete-Mir-15-P2b  Gga-Mir-15-P2b  Gja-Mir-15-P2b  Gmo-Mir-15-P2b  Hsa-Mir-15-P2b  Laf-Mir-15-P2b  Lch-Mir-15-P2b  Loc-Mir-15-P2b  Mal-Mir-15-P2b  Mml-Mir-15-P2b  Mmr-Mir-15-P2b  Mmu-Mir-15-P2b  Mun-Mir-15-P2b  Neu-Mir-15-P2b  Oan-Mir-15-P2b  Ocu-Mir-15-P2b  Pab-Mir-15-P2b  Pbv-Mir-15-P2b  Rno-Mir-15-P2b  Sha-Mir-15-P2b  Spt-Mir-15-P2b  Sto-Mir-15-P2b  Tgu-Mir-15-P2b  Tni-Mir-15-P2b  Xla-Mir-15-P2b1  Xla-Mir-15-P2b2  Xtr-Mir-15-P2b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(monDom5_add)		 7: 242919053-242919117 [-] UCSC Ensembl
Seed AGCAGCA
Precursor
(pre-Mir +30nt flank)		 
GGACGCCUCUGAUCCUUGCUUGUUCCACUCUAGCAGCACGUAAAUAUUGGCGUAGUGAAAUCAGUCUGAAACCCCAAUAUUACUGUGCUGCUUUAGUGUGGCAGGCCCACUCCAGCAAGGGUUGG
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Structure
        10          20        30         40        50        60  
GGACGCCUCUGAUCCUU--      UC    CU        -|   A      C  AGUGAAAU 
                   GCUUGU  CACU  AGCAGCAC GUAA UAUUGG GU        \
                   CGGACG  GUGA  UCGUCGUG CAUU AUAACC CA        C
GGUUGGGAACGACCUCACC      GU    UU        U^   -      C  AAGUCUGA 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
- +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-15-P2b_5p
mirBase accessionMIMAT0004145
Sequence 
0- UAGCAGCACGUAAAUAUUGGCGU -23
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Proposed targets TargetScanVert: mdo-miR-16-5p
Star sequence

Mdo-Mir-15-P2b_3p*
mirBase accessionMIMAT0031103
Sequence 
42- CCCAAUAUUACUGUGCUGCUUUA -65
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Proposed targets TargetScanVert: mdo-miR-16-2-3p