Mir-15-P2b

MirGeneDB ID

Mml-Mir-15-P2b

Family name

MIR-15 (all species)

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-16-2

Paralogues

Mml-Mir-15-P1a Mml-Mir-15-P1b Mml-Mir-15-P1c Mml-Mir-15-P1d Mml-Mir-15-P2a Mml-Mir-15-P2c Mml-Mir-15-P2d

Orthologues

Aca-Mir-15-P2b Ami-Mir-15-P2b Bta-Mir-15-P2b Cfa-Mir-15-P2b Cin-Mir-15-P2 Cja-Mir-15-P2b Cli-Mir-15-P2b Cmi-Mir-15-P2b Cpi-Mir-15-P2b Cpo-Mir-15-P2b Dno-Mir-15-P2b Dre-Mir-15-P2b Eca-Mir-15-P2b Ete-Mir-15-P2b Gga-Mir-15-P2b Gja-Mir-15-P2b Gmo-Mir-15-P2b Hsa-Mir-15-P2b Laf-Mir-15-P2b Lch-Mir-15-P2b Loc-Mir-15-P2b Mal-Mir-15-P2b Mdo-Mir-15-P2b Mmr-Mir-15-P2b Mmu-Mir-15-P2b Mun-Mir-15-P2b Neu-Mir-15-P2b Oan-Mir-15-P2b Ocu-Mir-15-P2b Pab-Mir-15-P2b Pbv-Mir-15-P2b Rno-Mir-15-P2b Sha-Mir-15-P2b Spt-Mir-15-P2b Sto-Mir-15-P2b Tgu-Mir-15-P2b Tni-Mir-15-P2b Xla-Mir-15-P2b1 Xla-Mir-15-P2b2 Xtr-Mir-15-P2b

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Olfactores

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014337.1: 62678464-62678528 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-15-P2b)

Mir-15-P1b CM014337.1: 62678317-62678376 [+] UCSC Ensembl
Mir-15-P2b CM014337.1: 62678464-62678528 [+] UCSC Ensembl

Seed

AGCAGCA

Precursor
(pre-Mir +30nt flank)

UUUGGAUGAACUGACAUACUUGUUCCACUCUAGCAGCACGUAAAUAUUGGCGUAGUGAAAUAUGUAUUAAACACCAAUAUUACUGUGCUGCUUCAGUGUGACAGGGAUAUAGCAACUAUUUUAUC

Get precursor sequence

Structure

        10          20        30         40        50        60  
UUUGGAUGAACUGACAUA--     UC    CU        -|   A      C  AGUGAAAU 
                    CUUGU  CACU  AGCAGCAC GUAA UAUUGG GU        \
                    GGACA  GUGA  UCGUCGUG CAUU AUAACC CA        A
CUAUUUUAUCAACGAUAUAG     GU    CU        U^   -      A  AAUUAUGU 
   120       110       100        90        80         70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-15-P2b_5p

mirBase accession

MIMAT0002651

Sequence

0- UAGCAGCACGUAAAUAUUGGCGU -23

Get sequence

Proposed targets

TargetScanVert: mml-miR-16-5p

Star sequence

Mml-Mir-15-P2b_3p*

mirBase accession

MIMAT0031018

Sequence

42- ACCAAUAUUACUGUGCUGCUUCA -65

Get sequence

Proposed targets

TargetScanVert: mml-miR-16-2-3p