Mir-15-P1a

MirGeneDB ID

Mml-Mir-15-P1a

Family name

MIR-15 (all species)

Seed

AGCAGCA

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-15a

Paralogues

Mml-Mir-15-P1b Mml-Mir-15-P1c Mml-Mir-15-P1d Mml-Mir-15-P2a Mml-Mir-15-P2b Mml-Mir-15-P2c Mml-Mir-15-P2d

Orthologues

Ami-Mir-15-P1a Bta-Mir-15-P1a Cfa-Mir-15-P1a Cin-Mir-15-P1 Cli-Mir-15-P1a Cmi-Mir-15-P1a Cpi-Mir-15-P1a Cpo-Mir-15-P1a Dno-Mir-15-P1a Dre-Mir-15-P1a1 Dre-Mir-15-P1a2 Ete-Mir-15-P1a Gga-Mir-15-P1a Gja-Mir-15-P1a Gmo-Mir-15-P1a2 Hsa-Mir-15-P1a Lch-Mir-15-P1a Loc-Mir-15-P1a Mal-Mir-15-P1a2 Mdo-Mir-15-P1a Mmu-Mir-15-P1a Mun-Mir-15-P1a Oan-Mir-15-P1a Ocu-Mir-15-P1a Rno-Mir-15-P1a Sha-Mir-15-P1a Spt-Mir-15-P1a Sto-Mir-15-P1a Tgu-Mir-15-P1a Tni-Mir-15-P1a2 Xla-Mir-15-P1a3 Xla-Mir-15-P1a4 Xtr-Mir-15-P1a

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Olfactores

Genome context
(rheMac8_trace)

chr17: 29400221-29400279 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-15-P1a)

Mir-15-P2a chr17: 29400075-29400139 [-] UCSC Ensembl
Mir-15-P1a chr17: 29400221-29400279 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GUUUAAAAAAAACAAAACCUUGGAGUAAAGUAGCAGCACAUAAUGGUUUGUGGAUUUUGAAAAGGUGCAGGCCAUAUUGUGCUGCCUCAAAAAUACAAGGAUCUGAUCUUCUGAAGAAA

Get precursor sequence

Structure

        10          20        30        40        50         
GUUUAAAAAAAACAAAA--|    GAGUAAAGUA        UA         GGAUUUU 
                   CCUUG          GCAGCACA  AUGGUUUGU       \
                   GGAAC          CGUCGUGU  UACCGGACG       G
AAAGAAGUCUUCUAGUCUA^    AUAAAAACUC        UA         UGGAAAA 
       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-15-P1a_5p

mirBase accession

MIMAT0002650

Sequence

0- UAGCAGCACAUAAUGGUUUGUG -22

Get sequence

Proposed targets

TargetScanVert: mml-miR-15a-5p

Star sequence

Mml-Mir-15-P1a_3p*

mirBase accession

MIMAT0026593

Sequence

37- CAGGCCAUAUUGUGCUGCCUCA -59

Get sequence

Proposed targets

TargetScanVert: mml-miR-15a-3p