MirGeneDB 2.1
MirGeneDB ID

Tgu-Mir-15-P1a

Family name MIR-15 (all species)
Seed AGCAGCA
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-15a
Paralogues Tgu-Mir-15-P1b  Tgu-Mir-15-P1c  Tgu-Mir-15-P2a  Tgu-Mir-15-P2b  Tgu-Mir-15-P2c 
Orthologues Ami-Mir-15-P1a  Bta-Mir-15-P1a  Cfa-Mir-15-P1a  Cin-Mir-15-P1  Cli-Mir-15-P1a  Cmi-Mir-15-P1a  Cpi-Mir-15-P1a  Cpo-Mir-15-P1a  Dno-Mir-15-P1a  Dre-Mir-15-P1a1  Dre-Mir-15-P1a2  Ete-Mir-15-P1a  Gga-Mir-15-P1a  Gja-Mir-15-P1a  Gmo-Mir-15-P1a2  Hsa-Mir-15-P1a  Lch-Mir-15-P1a  Loc-Mir-15-P1a  Mal-Mir-15-P1a2  Mdo-Mir-15-P1a  Mml-Mir-15-P1a  Mmu-Mir-15-P1a  Mun-Mir-15-P1a  Oan-Mir-15-P1a  Ocu-Mir-15-P1a  Rno-Mir-15-P1a  Sha-Mir-15-P1a  Spt-Mir-15-P1a  Sto-Mir-15-P1a  Tni-Mir-15-P1a2  Xla-Mir-15-P1a3  Xla-Mir-15-P1a4  Xtr-Mir-15-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(TaeGut1_add)		 1: 59559891-59559949 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1a)		 Mir-15-P2a 1: 59559746-59559808 [-] UCSC Ensembl
Mir-15-P1a 1: 59559891-59559949 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGAAGCAUUGUAGACACCUUGGCAUAACGUAGCAGCACAUAAUGGUUUGUGGGUUUUGAAAAGGUGCAGGCCAUAUUGUGCUGCCUCAAAAAUACAAGGAUUUCAUCACCCUGAAGAG
Get precursor sequence
Structure
        10          20        30        40        50         
UUGAAGCAUUGUAGACA--|    GCAUAACGUA        UA         GGGUUUU 
                   CCUUG          GCAGCACA  AUGGUUUGU       \
                   GGAAC          CGUCGUGU  UACCGGACG       G
GAGAAGUCCCACUACUUUA^    AUAAAAACUC        UA         UGGAAAA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-15-P1a_5p
mirBase accessionMIMAT0014555
Sequence 
0- UAGCAGCACAUAAUGGUUUGUG -22
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Star sequence

Tgu-Mir-15-P1a_3p*
mirBase accessionMIMAT0027000
Sequence 
37- CAGGCCAUAUUGUGCUGCCUCA -59
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