MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-15-P2a

Family name MIR-15 (all species)
Seed AGCAGCA
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-15-P1a  Cmi-Mir-15-P1b  Cmi-Mir-15-P1c  Cmi-Mir-15-P2b  Cmi-Mir-15-P2c 
Orthologues Ami-Mir-15-P2a  Bta-Mir-15-P2a  Cfa-Mir-15-P2a  Cin-Mir-15-P2  Cli-Mir-15-P2a  Cpi-Mir-15-P2a  Cpo-Mir-15-P2a  Dno-Mir-15-P2a  Dre-Mir-15-P2a1  Dre-Mir-15-P2a2  Ete-Mir-15-P2a  Gga-Mir-15-P2a  Gja-Mir-15-P2a  Gmo-Mir-15-P2a2  Hsa-Mir-15-P2a  Lch-Mir-15-P2a  Loc-Mir-15-P2a  Mal-Mir-15-P2a2  Mdo-Mir-15-P2a  Mml-Mir-15-P2a  Mmu-Mir-15-P2a  Mun-Mir-15-P2a  Oan-Mir-15-P2a  Ocu-Mir-15-P2a  Pbv-Mir-15-P2a  Rno-Mir-15-P2a  Sha-Mir-15-P2a  Spt-Mir-15-P2a  Sto-Mir-15-P2a  Tgu-Mir-15-P2a  Tni-Mir-15-P2a2  Xla-Mir-15-P2a3  Xla-Mir-15-P2a4  Xtr-Mir-15-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636198.1: 77560-77624 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAGCCCAAUUAUUGAUGUCAGCAGUGCUUUAGCAGCACGUAAAUAUUGGAGUUACGCUUUUUCCAAUGCCCCCAGUAUUAAUUGUGCUGCUGGAGUAAGGCUGACUGUUUCUGCUGCUACCAGA
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Structure
        10          20        30        40         50        60 
UGAGCCCAAUUAUUGAU--      AG               UA-|       AGUUACGCUU 
                   GUCAGC  UGCUUUAGCAGCACG   AAUAUUGG          U
                   CAGUCG  AUGAGGUCGUCGUGU   UUAUGACC          U
AGACCAUCGUCGUCUUUGU      GA               UAA^       CCCGUAACCU 
   120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Mir-15-P2a_5p
mirBase accessionNone
Sequence 
0- UAGCAGCACGUAAAUAUUGGAG -22
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Star sequence

Cmi-Mir-15-P2a_3p* (predicted)
mirBase accessionNone
Sequence 
42- CCAGUAUUAAUUGUGCUGCUGGA -65
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