MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-15-P2a2

Family name MIR-15 (all species)
Seed AGCAGCA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-15-P1a2  Mal-Mir-15-P1b  Mal-Mir-15-P2b  Mal-Mir-15-P2d 
Orthologues Ami-Mir-15-P2a  Bta-Mir-15-P2a  Cfa-Mir-15-P2a  Cin-Mir-15-P2  Cli-Mir-15-P2a  Cmi-Mir-15-P2a  Cpi-Mir-15-P2a  Cpo-Mir-15-P2a  Dno-Mir-15-P2a  Dre-Mir-15-P2a2  Ete-Mir-15-P2a  Gga-Mir-15-P2a  Gja-Mir-15-P2a  Gmo-Mir-15-P2a2  Hsa-Mir-15-P2a  Lch-Mir-15-P2a  Loc-Mir-15-P2a  Mdo-Mir-15-P2a  Mml-Mir-15-P2a  Mmu-Mir-15-P2a  Mun-Mir-15-P2a  Oan-Mir-15-P2a  Ocu-Mir-15-P2a  Pbv-Mir-15-P2a  Rno-Mir-15-P2a  Sha-Mir-15-P2a  Spt-Mir-15-P2a  Sto-Mir-15-P2a  Tgu-Mir-15-P2a  Tni-Mir-15-P2a2  Xtr-Mir-15-P2a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Olfactores
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884787.1: 2303226-2303289 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUUGUUCUCAUCUGCUGGUCACUUUACUGUAGCAGCACGUAAAUAUUGGAGUUAAGACUAAGUGAAGCCUCCAGUAUUGAUCGUGCUGCUGAAGCAAAGCUGACCACUCAGUCUUUGCAACUA
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Structure
        10         20         30        40         50        60 
AGUUGUUCUCAUCUGCU-     -    A  G          UA-|         UUAAGACU 
                  GGUCA CUUU CU UAGCAGCACG   AAUAUUGGAG        \
                  CCAGU GAAA GA GUCGUCGUGC   UUAUGACCUC        A
AUCAACGUUUCUGACUCA     C    C  A          UAG^         CGAAGUGA 
  120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-15-P2a2_5p

mirBase accessionNone
Sequence
0- UAGCAGCACGUAAAUAUUGGAG -22
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Star sequence

Mal-Mir-15-P2a2_3p*

mirBase accessionNone
Sequence
41- CCAGUAUUGAUCGUGCUGCUGAA -64
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