MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-148-P2

Family name MIR-148 (all species)
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-148
Paralogues Tni-Mir-148-P3 
Orthologues Cmi-Mir-148-P2  Dre-Mir-148-P2  Ebu-Mir-148  Gmo-Mir-148-P2  Loc-Mir-148-P2  Mal-Mir-148-P2  Pma-Mir-148-o2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 2: 13327074-13327133 [-] UCSC Ensembl
Seed CAGUGCA
Precursor
(pre-Mir +30nt flank)		 
CCUAUGAGGUGGCACUUUGGCUUUCCAAAUAAAGUUCUGUGAUACACUUCGACUCUGAUUCCUCGCAGUCAGUGCAUUACAGAACUUUGUUUAGGGAGUUAAAACUUUAACCUGUUGGAA
Get precursor sequence
Structure
        10          20        30        40        50        60
CCUAUGAGGUGGCACUU--|    UU C                 A    UC    CUGAU 
                   UGGCU  C AAAUAAAGUUCUGUGAU CACU  GACU     U
                   AUUGA  G UUUGUUUCAAGACAUUA GUGA  CUGA     C
AAGGUUGUCCAAUUUCAAA^    GG A                 C    --    CGCUC 
.       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
- +
Sp Sp Sp To
Star sequence

Tni-Mir-148-P2_5p*
mirBase accessionNone
Sequence 
0- AAAGUUCUGUGAUACACUUCGACU -24
Get sequence
Mature sequence

Tni-Mir-148-P2_3p
mirBase accessionMIMAT0002962
Sequence 
38- UCAGUGCAUUACAGAACUUUGU -60
Get sequence